(Q33385189)

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Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence

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scholarly article

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Europe PubMed Central

PubMed publication ID

26 July 2017

Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence (English)

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26 July 2017

Escherichia coli

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based on heuristic

inferred from title

13

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26 July 2017

Jennifer M Ritchie

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Jennifer M Ritchie

8

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ORCID Public Data File 2021

18

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Matthew K Waldor

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26 July 2017

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Bridget R Kulasekara

1

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26 July 2017

Michael Jacobs

2

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26 July 2017

Yang Zhou

3

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26 July 2017

Zaining Wu

4

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26 July 2017

Elizabeth Sims

5

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26 July 2017

Channakhone Saenphimmachak

6

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26 July 2017

Laurence Rohmer

7

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26 July 2017

Matthew Radey

9

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26 July 2017

Matthew McKevitt

10

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26 July 2017

Theodore Larson Freeman

11

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26 July 2017

Hillary Hayden

12

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26 July 2017

Will Gillett

14

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26 July 2017

Christine Fong

15

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26 July 2017

Jean Chang

16

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26 July 2017

Viktoriya Beskhlebnaya

17

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26 July 2017

Mansour Samadpour

19

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26 July 2017

Thomas S Whittam

20

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26 July 2017

Rajinder Kaul

21

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26 July 2017

Mitchell Brittnacher

22

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26 July 2017

Samuel I Miller

23

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26 July 2017

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publication date

29 June 2009

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26 July 2017

Infection and Immunity

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26 July 2017

77

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26 July 2017

9

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26 July 2017

3713-3721

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Europe PubMed Central

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26 July 2017

Shigella flexneri type III secretion system effectors OspB and OspF target the nucleus to downregulate the host inflammatory response via interactions with retinoblastoma protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Bacteriophage 2851 is a prototype phage for dissemination of the Shiga toxin variant gene 2c in Escherichia coli O157:H7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

A Dot/Icm-translocated ankyrin protein of Legionella pneumophila is required for intracellular proliferation within human macrophages and protozoa.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Ankyrin repeat proteins comprise a diverse family of bacterial type IV effectors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Large-insert genome analysis technology detects structural variation in Pseudomonas aeruginosa clinical strains from cystic fibrosis patients.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Variation in virulence among clades of Escherichia coli O157:H7 associated with disease outbreaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

The RAST Server: rapid annotations using subsystems technology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Pathogenesis and treatment of Shiga toxin-producing Escherichia coli infections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

The Shiga toxin genotype rather than the amount of Shiga toxin or the cytotoxicity of Shiga toxin in vitro correlates with the appearance of the hemolytic uremic syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Nitric oxide inhibits Shiga-toxin synthesis by enterohemorrhagic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Population structure of Pseudomonas aeruginosa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Heme acquisition by hemophores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Iron acquisition in Vibrio cholerae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Ankyrin repeat: a unique motif mediating protein-protein interactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Iron and pathogenesis of Shigella: iron acquisition in the intracellular environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Hemolytic uremic syndrome risk and Escherichia coli O157:H7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

The Shiga toxin 1-converting bacteriophage BP-4795 encodes an NleA-like type III effector protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Targeted, haplotype-resolved resequencing of long segments of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

The Shigella flexneri effector OspG interferes with innate immune responses by targeting ubiquitin-conjugating enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Enterohemorrhagic Escherichia coli (EHEC).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Epidemiology of Escherichia coli O157:H7 outbreaks, United States, 1982-2002.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Transcriptional analysis of genes encoding Shiga toxin 2 and its variants in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

The operator and early promoter region of the Shiga toxin type 2-encoding bacteriophage 933W and control of toxin expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Bacterial iron sources: from siderophores to hemophores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Complete Genome Sequence of the Genetically Tractable Hydrogenotrophic Methanogen Methanococcus maripaludis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Shiga toxin 2-converting bacteriophages associated with clonal variability in Escherichia coli O157:H7 strains of human origin isolated from a single outbreak

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Response to Shiga toxin 1 and 2 in a baboon model of hemolytic uremic syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Comparison of Shiga toxin production by hemolytic-uremic syndrome-associated and bovine-associated Shiga toxin-producing Escherichia coli isolates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Clinical Escherichia coli strains carrying stx genes: stx variants and stx-positive virulence profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Flavorubredoxin, an inducible catalyst for nitric oxide reduction and detoxification in Escherichia coli

1 reference

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21 June 2018

The genome of the natural genetic engineer Agrobacterium tumefaciens C58

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Automated finishing with autofinish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

A greedy algorithm for aligning DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

The risk of the hemolytic-uremic syndrome after antibiotic treatment of Escherichia coli O157:H7 infections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Massive outbreak of Escherichia coli O157:H7 infection in schoolchildren in Sakai City, Japan, associated with consumption of white radish sprouts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Epidemiology and diagnosis of Shiga toxin-producing Escherichia coli infections.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Associations between virulence factors of Shiga toxin-producing Escherichia coli and disease in humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Consed: a graphical tool for sequence finishing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

Base-calling of automated sequencer traces using phred. II. Error probabilities

1 reference

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21 June 2018

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2738036

21 June 2018

"Black holes" and bacterial pathogenicity: a large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli

1 reference

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21 June 2018

Diarrheagenic Escherichia coli

1 reference

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21 June 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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21 June 2018

Optical mapping approaches to molecular genomics

1 reference

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21 June 2018

Comparison of the relative toxicities of Shiga-like toxins type I and type II for mice

1 reference

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21 June 2018

Hemorrhagic Colitis Associated with a RareEscherichia coliSerotype

1 reference

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21 June 2018

Toxin genotypes and plasmid profiles as determinants of systemic sequelae in Escherichia coli O157:H7 infections

1 reference

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21 June 2018

A genetic locus of enteropathogenic Escherichia coli necessary for the production of attaching and effacing lesions on tissue culture cells

1 reference

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21 June 2018

Polysaccharides cellulose, poly-beta-1,6-n-acetyl-D-glucosamine, and colanic acid are required for optimal binding of Escherichia coli O157:H7 strains to alfalfa sprouts and K-12 strains to plastic but not for binding to epithelial cells

1 reference

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31 October 2018

Differential expression of stx2 variants in Shiga toxin-producing Escherichia coli belonging to seropathotypes A and C.

1 reference

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31 October 2018

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1 reference

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31 October 2018

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31 October 2018

Role of the GGDEF protein family in Salmonella cellulose biosynthesis and biofilm formation.

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31 October 2018

A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli

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31 October 2018

Haem iron-transport system in enterohaemorrhagic Escherichia coli O157:H7.

1 reference

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31 October 2018

Specific Interaction of Escherichia coli 0157:H7-Derived Shiga-like Toxin II with Human Renal Endothelial Cells

1 reference

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31 October 2018

Many cell types are Shiga toxin targets

1 reference

https://pubmed.ncbi.nlm.nih.gov/19564389

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/IAI.00198-09

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

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