(Q33394559)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19096501%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

title

Malleable machines in transcription regulation: the mediator complex (English)

1 reference

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18 January 2020

3

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18 January 2020

author name string

Agnes Tóth-Petróczy

1

1 reference

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18 January 2020

Christopher J Oldfield

2

1 reference

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18 January 2020

Yuichiro Takagi

4

1 reference

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18 January 2020

A Keith Dunker

5

1 reference

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18 January 2020

Vladimir N Uversky

6

1 reference

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18 January 2020

Monika Fuxreiter

7

1 reference

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18 January 2020

publication date

19 December 2008

1 reference

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PLOS Computational Biology

18 January 2020

published in

1 reference

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18 January 2020

volume

4

1 reference

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18 January 2020

page(s)

e1000243

1 reference

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18 January 2020

issue

12

1 reference

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Creative Commons Attribution 4.0 International

18 January 2020

copyright license

start time

19 December 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Malleable machines take shape in eukaryotic transcriptional regulation

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21 June 2018

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Role of intrinsic flexibility in signal transduction mediated by the cell cycle regulator, p27 Kip1.

21 June 2018

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Functional conservation of the glutamine-rich domains of yeast Gal11 and human SRC-1 in the transactivation of glucocorticoid receptor Tau 1 in Saccharomyces cerevisiae

21 June 2018

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Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions

21 June 2018

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21 June 2018

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Structural disorder promotes assembly of protein complexes

21 June 2018

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21 June 2018

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Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

21 June 2018

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Local structural disorder imparts plasticity on linear motifs.

21 June 2018

1 reference

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Identifying long-range structure in the intrinsically unstructured transactivation domain of p53.

21 June 2018

1 reference

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DisProt: the Database of Disordered Proteins

21 June 2018

1 reference

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The cyclin-dependent kinase 8 module sterically blocks Mediator interactions with RNA polymerase II.

21 June 2018

1 reference

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Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20.

21 June 2018

1 reference

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Analysis of molecular recognition features (MoRFs)

21 June 2018

1 reference

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Intrinsic disorder in transcription factors

21 June 2018

1 reference

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 June 2018

1 reference

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Intrinsic protein disorder, amino acid composition, and histone terminal domains.

21 June 2018

1 reference

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Mediator as a general transcription factor

21 June 2018

1 reference

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Mediator expression profiling epistasis reveals a signal transduction pathway with antagonistic submodules and highly specific downstream targets

21 June 2018

1 reference

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Structural disorder throws new light on moonlighting

21 June 2018

1 reference

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The interplay between structure and function in intrinsically unstructured proteins.

21 June 2018

1 reference

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Linear motifs: evolutionary interaction switches.

21 June 2018

1 reference

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Structure of eukaryotic Mediator complexes

21 June 2018

1 reference

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Mediator and the mechanism of transcriptional activation

21 June 2018

1 reference

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Intrinsically unstructured proteins and their functions

21 June 2018

1 reference

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Automated yeast two-hybrid screening for nuclear receptor-interacting proteins

21 June 2018

1 reference

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A high resolution protein interaction map of the yeast Mediator complex

21 June 2018

1 reference

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Kinetic profiles of p300 occupancy in vivo predict common features of promoter structure and coactivator recruitment

21 June 2018

1 reference

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BRCA1 function mediates a TRAP/DRIP complex through direct interaction with TRAP220

21 June 2018

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A set of consensus mammalian mediator subunits identified by multidimensional protein identification technology

21 June 2018

1 reference

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A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II

21 June 2018

1 reference

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RNA polymerase II structure, and organization of the preinitiation complex

21 June 2018

1 reference

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The importance of intrinsic disorder for protein phosphorylation

21 June 2018

1 reference

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The many colours of chromodomains.

21 June 2018

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TrSDB: a proteome database of transcription factors

21 June 2018

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Association of the Mediator complex with enhancers of active genes

21 June 2018

1 reference

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Intrinsically unstructured proteins evolve by repeat expansion

21 June 2018

1 reference

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Multiple sequence alignment with the Clustal series of programs

21 June 2018

1 reference

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Intrinsic disorder in cell-signaling and cancer-associated proteins

21 June 2018

1 reference

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A complex of the Srb8, -9, -10, and -11 transcriptional regulatory proteins from yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Evidence for a mediator of RNA polymerase II transcriptional regulation conserved from yeast to man

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Mammalian mediator subunit mMED8 is an Elongin BC-interacting protein that can assemble with Cul2 and Rbx1 to reconstitute a ubiquitin ligase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Integrating mRNA processing with transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Coupling of folding and binding for unstructured proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Structure, function, and activator-induced conformations of the CRSP coactivator

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Med9/Cse2 and Gal11 modules are required for transcriptional repression of distinct group of genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Recruitment of the transcriptional machinery through GAL11P: structure and interactions of the GAL4 dimerization domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Drosophila Mediator complex is broadly utilized by diverse gene-specific transcription factors at different types of core promoters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Structural organization of yeast and mammalian mediator complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Characterization of CAF4 and CAF16 reveals a functional connection between the CCR4-NOT complex and a subset of SRB proteins of the RNA polymerase II holoenzyme

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Sequence complexity of disordered protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

CBP/p300 in cell growth, transformation, and development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

A modified definition of Sov, a segment-based measure for protein secondary structure prediction assessment.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Mediator protein mutations that selectively abolish activated transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Evidence for a mediator cycle at the initiation of transcription.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Trinucleotide repeats and long homopeptides in genes and proteins associated with nervous system disease and development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Dynamic behavior of an intrinsically unstructured linker domain is conserved in the face of negligible amino acid sequence conservation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Head module control of mediator interactions

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Primary contact sites in intrinsically unstructured proteins: the case of calpastatin and microtubule-associated protein 2.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Characterization of segments from the central region of BRCA1: an intrinsically disordered scaffold for multiple protein-protein and protein-DNA interactions?

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Distinct conformational states of nuclear receptor-bound CRSP-Med complexes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Mutual targeting of mediator and the TFIIH kinase Kin28.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Preformed structural elements feature in partner recognition by intrinsically unstructured proteins.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Predicting intrinsic disorder from amino acid sequence

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Evolutionary rate heterogeneity in proteins with long disordered regions.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

Mediator-nucleosome interaction

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2588115

The structural and functional organization of the yeast mediator complex

31 October 2018

1 reference

12 December 2020

Acid blobs and negative noodles

1 reference

12 December 2020

Conserved structures of mediator and RNA polymerase II holoenzyme

1 reference

12 December 2020

A transcription reinitiation intermediate that is stabilized by activator

1 reference

12 December 2020

Cdk1 Triggers Association of RNA Polymerase to Cell Cycle Promoters Only after Recruitment of the Mediator by SBF

1 reference

12 December 2020

Structure of the yeast RNA polymerase II holoenzyme: Mediator conformation and polymerase interaction

1 reference

12 December 2020

Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1000243

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19096501%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/Toth-PetroczyOSTDUF08

18 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_mkh25d5yfvc25azcaudkscirlq

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mkh25d5yfvc25azcaudkscirlq

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19096501%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

1 reference