(Q33396751)

26 July 2017

Mismatch oligonucleotides in human and yeast: guidelines for probe design on tiling microarrays (English)

1 reference

26 July 2017

Joel Rozowsky

2

0 references

Mark Bender Gerstein

7

object named as

Mark Gerstein

1 reference

26 July 2017

6

Michael Snyder

1 reference

26 July 2017

Michael Seringhaus

1

1 reference

26 July 2017

Thomas Royce

3

1 reference

26 July 2017

Ugrappa Nagalakshmi

4

1 reference

26 July 2017

Justin Jee

5

1 reference

26 July 2017

language of work or name

English

0 references

publication date

31 December 2008

1 reference

26 July 2017

1 reference

26 July 2017

9

1 reference

26 July 2017

635

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-635

26 July 2017

0 references

cites work

Identification of an in vitro transcription-based artifact affecting oligonucleotide microarrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

High-resolution mapping of DNA copy alterations in human chromosome 22 using high-density tiling oligonucleotide arrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Base pair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Sequence dependence of cross-hybridization on short oligo microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Physicochemical perspectives on DNA microarray and biosensor technologies

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Guidelines for incorporating non-perfectly matched oligonucleotides into target-specific hybridization probes for a DNA microarray.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

The UCSC Genome Browser Database

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Resequencing and mutational analysis using oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Molecular interactions on microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Designing better probes: effect of probe size, mismatch position and number on hybridization in DNA oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

Selection of oligonucleotide probes for protein coding sequences

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

DNA hybridization to mismatched templates: a chip study.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2642824

OligoArray: genome-scale oligonucleotide design for microarrays

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19117516

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-9-635

1 reference

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference