(Q33398192)

26 July 2017

title

Large-scale prediction of long disordered regions in proteins using random forests (English)

1 reference

26 July 2017

1 reference

3

Raymond S Norton

1 reference

26 July 2017

Pengfei Han

1

1 reference

26 July 2017

Xiuzhen Zhang

series ordinal

2

1 reference

26 July 2017

Zhi-Ping Feng

series ordinal

4

1 reference

26 July 2017

publication date

7 January 2009

1 reference

26 July 2017

1 reference

26 July 2017

volume

10

1 reference

26 July 2017

page(s)

8

1 reference

Predicting disordered regions in proteins using the profiles of amino acid indices

26 July 2017

cites work

1 reference

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21 June 2018

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Natively unstructured regions in proteins identified from contact predictions

21 June 2018

1 reference

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PrDOS: prediction of disordered protein regions from amino acid sequence

21 June 2018

1 reference

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Intrinsic disorder and functional proteomics

21 June 2018

1 reference

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Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines.

21 June 2018

1 reference

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Protein disorder prediction by condensed PSSM considering propensity for order or disorder

21 June 2018

1 reference

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 June 2018

1 reference

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Length-dependent prediction of protein intrinsic disorder.

21 June 2018

1 reference

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Flexible nets. The roles of intrinsic disorder in protein interaction networks.

21 June 2018

1 reference

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Exploiting heterogeneous sequence properties improves prediction of protein disorder.

21 June 2018

1 reference

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Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Structural disorder throws new light on moonlighting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

The interplay between structure and function in intrinsically unstructured proteins.

21 June 2018

1 reference

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Addressing the intrinsic disorder bottleneck in structural proteomics.

21 June 2018

1 reference

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Intrinsically unstructured proteins and their functions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

DisProt: a database of protein disorder

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

The DISOPRED server for the prediction of protein disorder

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Protein disorder prediction: implications for structural proteomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Prediction of disordered regions in proteins from position specific score matrices

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

NORSp: Predictions of long regions without regular secondary structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

GlobPlot: Exploring protein sequences for globularity and disorder

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Improved amino acid flexibility parameters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Extended disordered proteins: targeting function with less scaffold

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Intrinsically unstructured proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Intrinsically disordered protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Roles of partly unfolded conformations in macromolecular self-assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Prediction of membrane protein types based on the hydrophobic index of amino acids

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

AAindex: amino acid index database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

21 June 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Enlarged representative set of protein structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

A simple method for displaying the hydropathic character of a protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Prediction of disordered regions in proteins based on the meta approach

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Disorder and sequence repeats in hub proteins and their implications for network evolution.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

FoldUnfold: web server for the prediction of disordered regions in protein chain.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Assessment of disorder predictions in CASP6.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Coupled folding and binding with alpha-helix-forming molecular recognition elements

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

To be folded or to be unfolded?

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Flavors of protein disorder

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Loopy proteins appear conserved in evolution.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Prediction of protein (domain) structural classes based on amino-acid index.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637845

Prediction of unfolded segments in a protein sequence based on amino acid composition

31 October 2018

1 reference

12 December 2020

Optimizing long intrinsic disorder predictors with protein evolutionary information

1 reference

12 December 2020

POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix

1 reference

12 December 2020

Predicting Protein Disorder for N-, C-, and Internal Regions

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-10-8

1 reference

26 July 2017

DBLP publication ID

journals/bmcbi/HanZNF09

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1019471049

0 references

Fatcat ID

release_u46mxv5xcbhkhowr2nxlpwdofi

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/u46mxv5xcbhkhowr2nxlpwdofi

24 November 2022

mapped directly with Wikidata item

PMC publication ID

2637845

1 reference

26 July 2017

1 reference