(Q33402467)

26 July 2017

title

Residues clustered in the light-sensing knot of phytochrome B are necessary for conformer-specific binding to signaling partner PIF3. (English)

1 reference

26 July 2017

Yoshito Oka

2

0 references

author name string

Elise A Kikis

1

1 reference

26 July 2017

Matthew E Hudson

3

1 reference

26 July 2017

Akira Nagatani

4

1 reference

26 July 2017

Peter H Quail

5

1 reference

26 July 2017

publication date

23 January 2009

1 reference

26 July 2017

1 reference

26 July 2017

volume

5

1 reference

26 July 2017

issue

1

1 reference

26 July 2017

page(s)

e1000352

1 reference

Creative Commons Attribution 4.0 International

26 July 2017

copyright license

start time

23 January 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Mutant screen distinguishes between residues necessary for light-signal perception and signal transfer by phytochrome B.

21 June 2018

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21 June 2018

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The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels

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Mutational analysis of Deinococcus radiodurans bacteriophytochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes

21 June 2018

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Phytochrome induces rapid PIF5 phosphorylation and degradation in response to red-light activation

21 June 2018

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High resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution

21 June 2018

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21 June 2018

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PIF1 is regulated by light-mediated degradation through the ubiquitin-26S proteasome pathway to optimize photomorphogenesis of seedlings in Arabidopsis

21 June 2018

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Multiple roles of a conserved GAF domain tyrosine residue in cyanobacterial and plant phytochromes

21 June 2018

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All are not equal: a benchmark of different homology modeling programs

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bHLH class transcription factors take centre stage in phytochrome signalling

21 June 2018

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The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development

21 June 2018

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21 June 2018

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Characterization of the requirements for localization of phytochrome B to nuclear bodies

21 June 2018

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Phytochrome ancestry: sensors of bilins and light.

21 June 2018

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Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method

21 June 2018

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PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis.

21 June 2018

1 reference

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The histidine kinase-related domain participates in phytochrome B function but is dispensable

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621353

Binding of phytochrome B to its nuclear signalling partner PIF3 is reversibly induced by light

21 June 2018

1 reference

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Yeast forward and reverse 'n'-hybrid systems

21 June 2018

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Use of gap repair in fission yeast to obtain novel alleles of specific genes

21 June 2018

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Biochemical characterization of Arabidopsis wild-type and mutant phytochrome B holoproteins.

21 June 2018

1 reference

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Phytochrome: if it looks and smells like a histidine kinase, is it a histidine kinase?

21 June 2018

1 reference

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Genetic characterization of a mammalian protein-protein interaction domain by using a yeast reverse two-hybrid system

21 June 2018

1 reference

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Reverse two-hybrid and one-hybrid systems to detect dissociation of protein-protein and DNA-protein interactions

21 June 2018

1 reference

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The reverse two-hybrid system: a genetic scheme for selection against specific protein/protein interactions

21 June 2018

1 reference

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Mutations affecting stability and deadenylation of the yeast MFA2 transcript

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621353

PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

The F-box protein MAX2 functions as a positive regulator of photomorphogenesis in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Dimers of the N-terminal domain of phytochrome B are functional in the nucleus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

A new type of mutation in the plant photoreceptor phytochrome B causes loss of photoreversibility and an extremely enhanced light sensitivity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Functional analysis of a 450-amino acid N-terminal fragment of phytochrome B in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

A molecular framework for light and gibberellin control of cell elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

PIL5, a phytochrome-interacting basic helix-loop-helix protein, is a key negative regulator of seed germination in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Functional Characterization of Phytochrome Interacting Factor 3 in Phytochrome-Mediated Light Signal Transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

The basic helix-loop-helix transcription factor PIF5 acts on ethylene biosynthesis and phytochrome signaling by distinct mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Light and Plant Development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000352

Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19165330

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mutation detection by a two-hybrid assay

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19165330

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1000352

1 reference

26 July 2017

1 reference

26 July 2017

1 reference