(Q33407865)

26 July 2017

title

Prediction of amyloid fibril-forming segments based on a support vector machine (English)

1 reference

26 July 2017

main subject

support vector machine

1 reference

Jian Tian

1

0 references

author name string

Ningfeng Wu

series ordinal

2

1 reference

26 July 2017

Jun Guo

series ordinal

3

1 reference

26 July 2017

Yunliu Fan

series ordinal

4

1 reference

26 July 2017

publication date

30 January 2009

1 reference

26 July 2017

1 reference

26 July 2017

volume

10 Suppl 1

1 reference

26 July 2017

page(s)

S45

1 reference

Predicting the phenotypic effects of non-synonymous single nucleotide polymorphisms based on support vector machines

26 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Artificial neural network models for prediction of intestinal permeability of oligopeptides

21 June 2018

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Prediction of amyloidogenic and disordered regions in protein chains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Sequence and structural determinants of amyloid fibril formation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Computational models for the prediction of polypeptide aggregation propensity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

The 3D profile method for identifying fibril-forming segments of proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

A support vector machine-based method for predicting the propensity of a protein to be soluble or to form inclusion body on overexpression in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Prediction of "hot spots" of aggregation in disease-linked polypeptides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Prediction of aggregation rate and aggregation-prone segments in polypeptide sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Structure of the cross-beta spine of amyloid-like fibrils

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Prediction of "aggregation-prone" and "aggregation-susceptible" regions in proteins associated with neurodegenerative diseases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Molecular basis for amyloid fibril formation and stability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Prediction of sequence-dependent and mutational effects on the aggregation of peptides and proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Detecting hidden sequence propensity for amyloid fibril formation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Protein aggregation and neurodegenerative disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

An amyloid-forming segment of beta2-microglobulin suggests a molecular model for the fibril

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

The role of aromaticity, exposed surface, and dipole moment in determining protein aggregation rates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Short amino acid stretches can mediate amyloid formation in globular proteins: the Src homology 3 (SH3) case

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Sequence determinants of amyloid fibril formation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Rationalization of the effects of mutations on peptide and protein aggregation rates.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

De novo designed peptide-based amyloid fibrils

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

The structural basis of protein folding and its links with human disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Assessing the accuracy of prediction algorithms for classification: an overview

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Gene ontology: tool for the unification of biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Amyloid fibrillogenesis: themes and variations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

AAindex: amino acid index database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

AAindex: Amino Acid Index Database.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

The alternative conformations of amyloidogenic proteins and their multi-step assembly pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Protein aggregation: folding aggregates, inclusion bodies and amyloid

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Identification of amyloid fibril-forming segments based on structure and residue-based statistical potential

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

How evolutionary pressure against protein aggregation shaped chaperone specificity

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Support vector machine approach for protein subcellular localization prediction

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Prediction of the Absolute Aggregation Rates of Amyloidogenic Polypeptide Chains

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648769

Accuracy of protein flexibility predictions

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19208147

12 December 2020

inferred from PubMed ID database lookup

Understanding the relationship between the primary structure of proteins and their amyloidogenic propensity: clues from inclusion body formation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19208147

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2105-10-S1-S45

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/vwjn2uuvsfbs5nf27wzeozmehm

30 July 2022

DBLP publication ID

journals/bmcbi/TianWGF09

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1026414399

0 references

Fatcat ID

release_vwjn2uuvsfbs5nf27wzeozmehm

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/vwjn2uuvsfbs5nf27wzeozmehm

30 July 2022

https://api.fatcat.wiki/v0/release/vwjn2uuvsfbs5nf27wzeozmehm

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/vwjn2uuvsfbs5nf27wzeozmehm

1 reference

30 July 2022