(Q33407992)

26 July 2017

title

Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full text (English)

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26 July 2017

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2

Russ B Altman

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26 July 2017

Yael Garten

1

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26 July 2017

publication date

5 February 2009

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26 July 2017

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26 July 2017

volume

10 Suppl 2

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26 July 2017

page(s)

S6

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Creative Commons Attribution 2.0 Generic

26 July 2017

copyright license

start time

1 February 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Extracting semantic predications from Medline citations for pharmacogenomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

MutationFinder: a high-performance system for extracting point mutation mentions from text

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Automatic extraction of protein point mutations using a graph bigram association.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Relemed: sentence-level search engine with relevance score for the MEDLINE database of biomedical articles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Supporting the curation of biological databases with reusable text mining

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

An automated procedure to identify biomedical articles that contain cancer-associated gene variants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Text detective: a rule-based system for gene annotation in biomedical texts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Text mining for metabolic pathways, signaling cascades, and protein networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

A statistical approach to scanning the biomedical literature for pharmacogenetics knowledge

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Extracting and characterizing gene-drug relationships from the literature

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Textpresso: an ontology-based information retrieval and extraction system for biological literature

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Inferring pathways from gene lists using a literature-derived network of biological relationships.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

Ticlopidine as a selective mechanism-based inhibitor of human cytochrome P450 2C19.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2646239

10.1186/1471-2105-10-S2-S6

31 October 2018

Identifiers

DOI

1 reference

26 July 2017

DBLP publication ID

journals/bmcbi/GartenA09

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DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

26 July 2017

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