(Q33411297)

26 July 2017

title

Phylogenomics: gene duplication, unrecognized paralogy and outgroup choice (English)

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26 July 2017

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1 reference

Scott William Roy

1

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26 July 2017

language of work or name

English

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publication date

23 February 2009

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26 July 2017

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26 July 2017

volume

4

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26 July 2017

issue

2

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26 July 2017

page(s)

e4568

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Creative Commons CC0 License

26 July 2017

copyright license

start time

23 February 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

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cites work

Homoplasy in genome-wide analysis of rare amino acid replacements: the molecular-evolutionary basis for Vavilov's law of homologous series

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Bias in phylogenetic tree reconciliation methods: implications for vertebrate genome evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

A phylogenetic mixture model for detecting pattern-heterogeneity in gene sequence or character-state data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Increased taxon sampling greatly reduces phylogenetic error

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Extensive genomic duplication during early chordate evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

The evolutionary fate and consequences of duplicate genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

SplitsTree: analyzing and visualizing evolutionary data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Molecular evidence for an ancient duplication of the entire yeast genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Distinguishing Homologous from Analogous Proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640465

Phylogenetic MCMC algorithms are misleading on mixtures of trees.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004568

A bias in ML estimates of branch lengths in the presence of multiple signals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004568

Testing congruence in phylogenomic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004568

Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004568

Descendants of whole genome duplication within gene order phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004568

Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004568

10.1371/JOURNAL.PONE.0004568

21 January 2018

Identifiers

DOI

1 reference

release_6hamgd3wxfgsdbe7luf2ygptmy

26 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/6hamgd3wxfgsdbe7luf2ygptmy

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

2640465

1 reference

26 July 2017

1 reference