(Q33414663)

26 July 2017

title

Non-negative matrix factorization for the analysis of complex gene expression data: identification of clinically relevant tumor subtypes (English)

1 reference

non-negative matrix factorization

26 July 2017

main subject

0 references

2

Mattias Höglund

1 reference

26 July 2017

Attila Frigyesi

1

1 reference

26 July 2017

language of work or name

1 reference

29 May 2008

1 reference

26 July 2017

1 reference

26 July 2017

volume

6

1 reference

26 July 2017

page(s)

275-292

1 reference

Sparse non-negative matrix factorizations via alternating non-negativity-constrained least squares for microarray data analysis

26 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Metagene projection for cross-platform, cross-species characterization of global transcriptional states

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Inferential, robust non-negative matrix factorization analysis of microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

bioNMF: a versatile tool for non-negative matrix factorization in biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Independent component analysis reveals new and biologically significant structures in micro array data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

LS-NMF: a modified non-negative matrix factorization algorithm utilizing uncertainty estimates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Use of gene-expression profiling to identify prognostic subclasses in adult acute myeloid leukemia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Metagenes and molecular pattern discovery using matrix factorization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Identifying biological themes within lists of genes with EASE

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Subsystem identification through dimensionality reduction of large-scale gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Prediction of central nervous system embryonal tumour outcome based on gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Diversity of gene expression in adenocarcinoma of the lung

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Learning the parts of objects by non-negative matrix factorization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Improving molecular cancer class discovery through sparse non-negative matrix factorization.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623306

Two subclasses of lung squamous cell carcinoma with different gene expression profiles and prognosis identified by hierarchical clustering and non-negative matrix factorization

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19259414

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular classification of head and neck squamous cell carcinomas using patterns of gene expression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19259414

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

0 references

1 reference

26 July 2017

1 reference