(Q33427610)

26 July 2017

title

IMGD: an integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes (English)

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26 July 2017

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Jaeyoung Choi

3

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Jongsun Park

object named as

Jongsun Park

2

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Seogchan Kang

object named as

Seogchan Kang

10

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author name string

Wonhoon Lee

1

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26 July 2017

Kyongyong Jung

4

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26 July 2017

Bongsoo Park

5

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26 July 2017

Donghan Kim

6

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26 July 2017

Jaeyoung Lee

7

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26 July 2017

Kyohun Ahn

8

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26 July 2017

Wonho Song

9

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26 July 2017

Yong-Hwan Lee

11

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26 July 2017

Seunghwan Lee

12

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26 July 2017

language of work or name

English

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publication date

7 April 2009

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26 July 2017

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26 July 2017

volume

10

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26 July 2017

page(s)

148

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SNUGB: a versatile genome browser supporting comparative and functional fungal genomics

26 July 2017

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21 June 2018

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BARCODING: bold: The Barcode of Life Data System (http://www.barcodinglife.org)

21 June 2018

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A comparative analysis of mitochondrial genomes in Coleoptera (Arthropoda: Insecta) and genome descriptions of six new beetles

21 June 2018

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Fungal cytochrome P450 database

21 June 2018

1 reference

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Phylogeny of the Heelwalkers (Insecta: Mantophasmatodea) based on mtDNA sequences, with evidence for additional taxa in South Africa

21 June 2018

1 reference

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Complete nucleotide sequence and organization of the mitogenome of the silk moth Caligula boisduvalii (Lepidoptera: Saturniidae) and comparison with other lepidopteran insects

21 June 2018

1 reference

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FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors

21 June 2018

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DNA barcodes: genes, genomics, and bioinformatics

21 June 2018

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MtDNA COI barcodes reveal cryptic diversity in the Baetis vernus group (Ephemeroptera, Baetidae).

21 June 2018

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21 June 2018

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Mitome: dynamic and interactive database for comparative mitochondrial genomics in metazoan animals

21 June 2018

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Genome-wide analysis of T-DNA integration into the chromosomes of Magnaporthe oryzae

21 June 2018

1 reference

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Global relationships of Bemisia tabaci (Hemiptera: Aleyrodidae) revealed using Bayesian analysis of mitochondrial COI DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Mitochondrial genomic comparisons of the subterranean termites from the Genus Reticulitermes (Insecta: Isoptera: Rhinotermitidae).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

PAML 4: phylogenetic analysis by maximum likelihood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Patterns of evolution of mitochondrial cytochrome c oxidase I and II DNA and implications for DNA barcoding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

The complete mitochondrial genome of Flustrellidra hispida and the phylogenetic position of Bryozoa among the Metazoa

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

DNA barcodes distinguish species of tropical Lepidoptera

21 June 2018

1 reference

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GOBASE--a database of organelle and bacterial genome information

21 June 2018

1 reference

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PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference

21 June 2018

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BLAST: at the core of a powerful and diverse set of sequence analysis tools

21 June 2018

1 reference

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Mitochondrial DNA in the Drosophila melanogaster complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Mfold web server for nucleic acid folding and hybridization prediction

21 June 2018

1 reference

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OGRe: a relational database for comparative analysis of mitochondrial genomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Complete mitochondrial DNA sequence and amino acid analysis of the cytochrome C oxidase subunit I (COI) from Aedes aegypti

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Organelle genome resource at NCBI.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

The current state of insect molecular systematics: a thriving Tower of Babel

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Animal mitochondrial genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Sequencing goes 454 and takes large-scale genomics into the wild

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Utility of DNA taxonomy and barcoding for the inference of larval community structure in morphologically cryptic Chironomus (Diptera) species.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Using COI barcodes to identify forensically and medically important blowflies.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Genome-wide functional analysis of pathogenicity genes in the rice blast fungus.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

AMiGA: the arthropodan mitochondrial genomes accessible database

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

MamMiBase: a mitochondrial genome database for mammalian phylogenetic studies

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Dramatically elevated rate of mitochondrial substitution in lice (Insecta: Phthiraptera).

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Significant levels of sequence divergence and gene rearrangements have occurred between the mitochondrial genomes of the wild mulberry silkmoth, Bombyx mandarina, and its close relative, the domesticated silkmoth, Bombyx mori

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Multiple genes and the monophyly of Ischnocera (Insecta: Phthiraptera).

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

A major mitochondrial gene rearrangement among closely related species

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Relationships among the cyclostome braconid (Hymenoptera: Braconidae) subfamilies inferred from a mitochondrial tRNA gene rearrangement

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Big trees from little genomes: mitochondrial gene order as a phylogenetic tool

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Gene translocation links insects and crustaceans.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

Deducing the pattern of arthropod phytogeny from mitochondrial DNA rearrangements

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2681477

31 October 2018

Identifiers

DOI

10.1186/1471-2164-10-148

1 reference

Dimensions Publication ID

26 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-148

9 September 2019

1 reference

26 July 2017

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