(Q33434903)

English

Cross-species mapping of bidirectional promoters enables prediction of unannotated 5' UTRs and identification of species-specific transcripts

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scholarly article

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Europe PubMed Central

26 July 2017

Cross-species mapping of bidirectional promoters enables prediction of unannotated 5' UTRs and identification of species-specific transcripts (English)

1 reference

Europe PubMed Central

26 July 2017

6

object named as

Laura Elnitski

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Helen Piontkivska

1

object named as

Helen Piontkivska

1 reference

Europe PubMed Central

26 July 2017

author name string

Mary Q Yang

2

1 reference

Europe PubMed Central

26 July 2017

Denis M Larkin

3

1 reference

Europe PubMed Central

26 July 2017

Harris A Lewin

4

1 reference

Europe PubMed Central

26 July 2017

James Reecy

5

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Europe PubMed Central

26 July 2017

language of work or name

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publication date

24 April 2009

1 reference

Europe PubMed Central

26 July 2017

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Europe PubMed Central

26 July 2017

10

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Europe PubMed Central

26 July 2017

189

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Europe PubMed Central

26 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-189

0 references

The genome sequence of taurine cattle: a window to ruminant biology and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Divergent transcription from active promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Chromatin remodelling at promoters suppresses antisense transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

The vertebrate genome annotation (Vega) database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Comprehensive annotation of bidirectional promoters identifies co-regulation among breast and ovarian cancer genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

The otter annotation system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Aligning multiple genomic sequences with the threaded blockset aligner

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Cross-species sequence comparisons: a review of methods and available resources

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Evolution of the RECQ family of helicases: A drosophila homolog, Dmblm, is similar to the human bloom syndrome gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

21 June 2018

The UCSC Known Genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

31 October 2018

Origins of bidirectional promoters: computational analyses of intergenic distance in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

31 October 2018

Genomic clocks and evolutionary timescales.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

31 October 2018

Bidirectional gene organization: a common architectural feature of the human genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688522

31 October 2018

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://pubmed.ncbi.nlm.nih.gov/19393065

12 December 2020

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Identifiers

10.1186/1471-2164-10-189

1 reference

Europe PubMed Central

26 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-189

9 September 2019

1 reference

Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

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