(Q33446909)

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Chromophore structure of cyanobacterial phytochrome Cph1 in the Pr state: reconciling structural and spectroscopic data by QM/MM calculations

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Chromophore structure of cyanobacterial phytochrome Cph1 in the Pr state: reconciling structural and spectroscopic data by QM/MM calculations (English)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

1 reference

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Maria Andrea Mroginski

1

object named as

Maria Andrea Mroginski

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

David von Stetten

2

object named as

David von Stetten

0 references

Francisco Velazquez Escobar

object named as

Francisco Velazquez Escobar

3

0 references

Patrick Scheerer

object named as

Patrick Scheerer

6

0 references

Daniel H. Murgida

object named as

Daniel H Murgida

8

0 references

Wolfgang Gartner

object named as

Wolfgang Gärtner

11

0 references

Peter Hildebrandt

object named as

Peter Hildebrandt

15

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author name string

Holger M Strauss

4

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Steve Kaminski

5

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Mina Günther

7

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Peter Schmieder

9

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Christian Bongards

10

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Jo Mailliet

12

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Jon Hughes

13

1 reference

Europe PubMed Central

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26 July 2017

Lars-Oliver Essen

14

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26 July 2017

language of work or name

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publication date

1 May 2009

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Europe PubMed Central

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26 July 2017

Biophysical Journal

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Europe PubMed Central

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26 July 2017

96

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Europe PubMed Central

PubMed publication ID

26 July 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

4153-4163

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

The structure of a complete phytochrome sensory module in the Pr ground state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Characterization of two thermostable cyanobacterial phytochromes reveals global movements in the chromophore-binding domain during photoconversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Mutational analysis of Deinococcus radiodurans bacteriophytochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

The chromophore structures of the Pr States in plant and bacterial phytochromes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Quantum mechanics/molecular mechanics calculation of the Raman spectra of the phycocyanobilin chromophore in alpha-C-phycocyanin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

High resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Chromophore structure in the photocycle of the cyanobacterial phytochrome Cph1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Phytochrome structure and signaling mechanisms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Chromophore structure of the physiologically active form (P(fr)) of phytochrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Structure/function correlations of proteins using MM, QM/MM, and related approaches: methods, concepts, pitfalls, and current progress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

A prokaryotic phytochrome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Resonance raman analysis of chromophore structure in the lumi-R photoproduct of phytochrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Resonance Raman analysis of the Pr and Pfr forms of phytochrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Resonance Raman study on intact pea phytochrome and its model compounds: evidence for proton migration during the phototransformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Fourier transform resonance Raman spectroscopy of phytochrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

21 June 2018

Heteronuclear NMR investigation on the structure and dynamics of the chromophore binding pocket of the cyanobacterial phytochrome Cph1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

The chromophore structural changes during the photocycle of phytochrome: a combined resonance Raman and quantum chemical approach.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Highly conserved residues Asp-197 and His-250 in Agp1 phytochrome control the proton affinity of the chromophore and Pfr formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Calculation of vibrational spectra of linear tetrapyrroles. 4. Methine bridge C-H out-of-plane modes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Calculation of vibrational spectra of linear tetrapyrroles. 3. Hydrogen-bonded hexamethylpyrromethene dimers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Light-induced proton release of phytochrome is coupled to the transient deprotonation of the tetrapyrrole chromophore

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Determination of the chromophore structures in the photoinduced reaction cycle of phytochrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Recombinant holophytochrome in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Chromophore Heterogeneity and Photoconversion in Phytochrome Crystals and Solution Studied by Resonance Raman Spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Raman Spectroscopic and Light-Induced Kinetic Characterization of a Recombinant Phytochrome of the CyanobacteriumSynechocystis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2712200

31 October 2018

Resonance Raman spectroscopic study of the tryptic 39-kDa fragment of phytochrome

1 reference

https://pubmed.ncbi.nlm.nih.gov/19450486

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protonation State and Structural Changes of the Tetrapyrrole Chromophore during the Pr→ PfrPhototransformation of Phytochrome: A Resonance Raman Spectroscopic Study†

1 reference

https://pubmed.ncbi.nlm.nih.gov/19450486

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fourier-Transform Resonance Raman Spectroscopy of Intermediates of the Phytochrome Photocycle

1 reference

https://pubmed.ncbi.nlm.nih.gov/19450486

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resonance Raman spectra of the Pr-form of phytochrome

1 reference

https://pubmed.ncbi.nlm.nih.gov/19450486

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of chromophore exchange on the resonance Raman spectra of recombinant phytochromes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19450486

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heteronuclear solution-state NMR studies of the chromophore in cyanobacterial phytochrome Cph1

1 reference

https://pubmed.ncbi.nlm.nih.gov/19450486

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.BPJ.2009.02.029

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

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