(Q33467601)

27 July 2017

title

Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus (English)

1 reference

27 July 2017

13

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27 July 2017

Sarah Connell

3

0 references

Olivier Hanotte

object named as

Olivier Hanotte

11

0 references

David J. Lynn

object named as

David J Lynn

2

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author name string

Tim Downing

1

1 reference

27 July 2017

Andrew T Lloyd

4

1 reference

27 July 2017

A K Bhuiyan

5

1 reference

27 July 2017

Pradeepa Silva

6

1 reference

27 July 2017

A N Naqvi

7

1 reference

27 July 2017

Rahamame Sanfo

8

1 reference

27 July 2017

Racine-Samba Sow

9

1 reference

27 July 2017

Baitsi Podisi

10

1 reference

27 July 2017

Cliona O'Farrelly

12

1 reference

27 July 2017

language of work or name

1 reference

15 June 2009

1 reference

27 July 2017

published in

BMC Evolutionary Biology

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27 July 2017

volume

9

1 reference

27 July 2017

page(s)

136

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-9-136

27 July 2017

exact match

0 references

cites work

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21 June 2018

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Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds.

21 June 2018

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21 June 2018

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Human trophoblast cells express the immunomodulator progesterone-induced blocking factor

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Delayed goblet cell hyperplasia, acetylcholine receptor expression, and worm expulsion in SMC-specific IL-4Ralpha-deficient mice

21 June 2018

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A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Progesterone-induced blocking factor activates STAT6 via binding to a novel IL-4 receptor

21 June 2018

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Multiple maternal origins of chickens: out of the Asian jungles

21 June 2018

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Genomic regions exhibiting positive selection identified from dense genotype data

21 June 2018

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Molecular evidence for hybridization of species in the genus Gallus except for Gallus varius

21 June 2018

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Regulation of gene-activation pathways by PIAS proteins in the immune system

21 June 2018

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21 June 2018

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Effects of common atopy-associated amino acid substitutions in the IL-4 receptor alpha chain on IL-4 induced phenotypes.

21 June 2018

1 reference

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Bayes empirical bayes inference of amino acid sites under positive selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Evolutionary expressed sequence tag analysis of Drosophila female reproductive tracts identifies genes subjected to positive selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Population history and natural selection shape patterns of genetic variation in 132 genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Associations between specific serum IgE response and 6 variants within the genes IL4, IL13, and IL4RA in German children: the German Multicenter Atopy Study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

DnaSP, DNA polymorphism analyses by the coalescent and other methods

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

PANTHER: a library of protein families and subfamilies indexed by function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Inference of selection from multiple species alignments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

A New Statistical Method for Haplotype Reconstruction from Population Data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Hitchhiking under positive Darwinian selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Atopy and asthma: genetic variants of IL-4 and IL-13 signalling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Inhibition of Stat1-mediated gene activation by PIAS1

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Consed: a graphical tool for sequence finishing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Base-calling of automated sequencer traces using phred. II. Error probabilities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

The association of atopy with a gain-of-function mutation in the alpha subunit of the interleukin-4 receptor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Specific inhibition of Stat3 signal transduction by PIAS3

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

PAML: a program package for phylogenetic analysis by maximum likelihood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

A test of neutrality based on interlocus associations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Monophyletic origin and unique dispersal patterns of domestic fowls

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Identification of protein coding regions by database similarity search

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Statistical tests of neutrality of mutations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

One subspecies of the red junglefowl (Gallus gallus gallus) suffices as the matriarchic ancestor of all domestic breeds

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Evolutionary relationship of DNA sequences in finite populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Statistical properties of the number of recombination events in the history of a sample of DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Adaptive protein evolution at the Adh locus in Drosophila

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Human immunodeficiency virus type 1 tat gene up-regulates interleukin 4 receptors on a human B-lymphoblastoid cell line.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

On the number of segregating sites in genetical models without recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Quantification of adaptive evolution of genes expressed in avian brain and the population size effect on the efficacy of selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Mitochondrial DNA D-loop sequences suggest a Southeast Asian and Indian origin of Zimbabwean village chickens

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Positive diversifying selection in avian Mx genes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

The legacy of domestication: accumulation of deleterious mutations in the dog genome

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Modulation of the immune responses in chickens by low-pathogenicity avian influenza virus H9N2.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Single locus typing of MHC class I and class II B loci in a population of red jungle fowl.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Analysis of mtDNA sequences shows Japanese native chickens have multiple origins.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Insertion events of CR1 retrotransposable elements elucidate the phylogenetic branching order in galliform birds

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Skewed allele frequencies of an Mx gene mutation with potential resistance to avian influenza virus in different chicken populations.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

A population genetics study of single nucleotide polymorphisms in the interleukin 4 receptor alpha (IL4RA) gene

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Identification of a novel single-nucleotide polymorphism (Val554Ile) and definition of eight common alleles for human IL4RA exon 11.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Neutrality tests based on the distribution of haplotypes under an infinite-site model.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Interleukin-4 and interleukin-4 receptor polymorphisms and colorectal cancer risk

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224688

Estimating the recombination parameter of a finite population model without selection

31 October 2018

1 reference

12 December 2020

Common polymorphisms in the coding part of the IL4-receptor gene

1 reference

12 December 2020

The polymorphisms S503P and Q576R in the interleukin-4 receptor alpha gene are associated with atopy and influence the signal transduction

1 reference

12 December 2020

Purifying selection and positive selection on the myxovirus resistance gene in mammals and chickens

1 reference

12 December 2020

Association of the interleukin-4 receptor alpha variant Q576R with Th1/Th2 imbalance in connective tissue disease

1 reference

12 December 2020

Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-9-136

1 reference

Dimensions Publication ID

27 July 2017

0 references

1 reference

27 July 2017

1 reference