(Q33491547)

27 July 2017

Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence (English)

1 reference

27 July 2017

10

Carlos D Bustamante

1 reference

27 July 2017

Andrew G Clark

11

1 reference

ORCID Public Data File 2021

Michele Cargill

8

object named as

Michele Cargill

1 reference

27 July 2017

4

Amit Indap

1 reference

27 July 2017

Dara G Torgerson

1

1 reference

27 July 2017

Adam R Boyko

2

1 reference

27 July 2017

Ryan D Hernandez

3

1 reference

27 July 2017

Xiaolan Hu

5

1 reference

27 July 2017

Thomas J White

6

1 reference

27 July 2017

John J Sninsky

7

1 reference

27 July 2017

Mark D Adams

9

1 reference

27 July 2017

7 August 2009

1 reference

27 July 2017

1 reference

27 July 2017

5

1 reference

27 July 2017

8

1 reference

27 July 2017

e1000592

1 reference

Creative Commons Attribution 4.0 International

27 July 2017

start time

7 August 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Gene expression levels are a target of recent natural selection in the human genome

1 reference

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Gene regulation in primates evolves under tissue-specific selection pressures

21 June 2018

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High-resolution mapping of expression-QTLs yields insight into human gene regulation

21 June 2018

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A flexible forward simulator for populations subject to selection and demography

21 June 2018

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Genome-wide analysis of natural selection on human cis-elements

21 June 2018

1 reference

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"Reverse ecology" and the power of population genomics

21 June 2018

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Selective constraints in experimentally defined primate regulatory regions.

21 June 2018

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Natural selection on genes that underlie human disease susceptibility

21 June 2018

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Assessing the evolutionary impact of amino acid mutations in the human genome

21 June 2018

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Positive and negative selection on noncoding DNA in Drosophila simulans

21 June 2018

1 reference

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Proportionally more deleterious genetic variation in European than in African populations.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Recent and ongoing selection in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Adaptive evolution of conserved noncoding elements in mammals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution.

21 June 2018

1 reference

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Widely distributed noncoding purifying selection in the human genome

21 June 2018

1 reference

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Fast-evolving noncoding sequences in the human genome

21 June 2018

1 reference

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Conservation of regional gene expression in mouse and human brain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

In vivo enhancer analysis of human conserved non-coding sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Accelerated evolution of conserved noncoding sequences in humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Forces shaping the fastest evolving regions in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Close sequence comparisons are sufficient to identify human cis-regulatory elements.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Heterotachy in mammalian promoter evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

A map of recent positive selection in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Hearing silence: non-neutral evolution at synonymous sites in mammals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Global landscape of recent inferred Darwinian selection for Homo sapiens

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Genome-wide associations of gene expression variation in humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Selective constraint on noncoding regions of hominid genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Natural selection on protein-coding genes in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Comparative anatomy of the facial motor nucleus in mammals, with an analysis of neuron numbers in primates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

The scale of mutational variation in the murid genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Effects of natural selection on interpopulation divergence at polymorphic sites in human protein-coding Loci

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Simultaneous inference of selection and population growth from patterns of variation in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

A scan for positively selected genes in the genomes of humans and chimpanzees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Assessing computational tools for the discovery of transcription factor binding sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Regulatory polymorphisms underlying complex disease traits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

The extracellular matrix gene Frem1 is essential for the normal adhesion of the embryonic epidermis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Regional patterns of gene expression in human and chimpanzee brains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

The genetic association database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

A gene atlas of the mouse and human protein-encoding transcriptomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Mixed-Model Reanalysis of Primate Data Suggests Tissue and Species Biases in Oligonucleotide-Based Gene Expression Profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Elevated gene expression levels distinguish human from non-human primate brains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Selection on rapidly evolving proteins in the Arabidopsis genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

The UCSC Genome Browser Database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Abundant raw material for cis-regulatory evolution in humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

The human genome browser at UCSC

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Intra- and interspecific variation in primate gene expression patterns

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

BLAT—The BLAST-Like Alignment Tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Gene ontology: tool for the unification of biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Linked regularities in the development and evolution of mammalian brains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Evolution at two levels in humans and chimpanzees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2714078

Adaptive evolution of non-coding DNA in Drosophila

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Evolutionary constraints in conserved nongenic sequences of mammals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

The cost of inbreeding in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Context dependence, ancestral misidentification, and spurious signatures of natural selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Conserved noncoding sequences are selectively constrained and not mutation cold spots

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Gene Expression Evolves Faster in Narrowly Than in Broadly Expressed Mammalian Genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000592

Low rates of expression profile divergence in highly expressed genes and tissue-specific genes during mammalian evolution

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19662163

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1000592

1 reference

release_wtffswziezbgtbjdc5ygnib37a

27 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/wtffswziezbgtbjdc5ygnib37a

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

2714078

1 reference

27 July 2017

1 reference