(Q33497640)

27 July 2017

title

Weighted gene co-expression network analysis of the peripheral blood from Amyotrophic Lateral Sclerosis patients (English)

1 reference

amyotrophic lateral sclerosis

27 July 2017

main subject

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patient

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author

Leonard H van den Berg

11

object named as

Leonard H van den Berg

1 reference

27 July 2017

10

Jan H Veldink

1 reference

27 July 2017

9

John H J Wokke

1 reference

27 July 2017

Christiaan G J Saris

1

1 reference

27 July 2017

Steve Horvath

2

1 reference

27 July 2017

Paul W J van Vught

3

1 reference

27 July 2017

Michael A van Es

4

1 reference

27 July 2017

Hylke M Blauw

5

1 reference

27 July 2017

Tova F Fuller

6

1 reference

27 July 2017

Peter Langfelder

7

1 reference

27 July 2017

Joseph DeYoung

8

1 reference

27 July 2017

Roel A Ophoff

12

1 reference

27 July 2017

language of work or name

English

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publication date

27 August 2009

1 reference

27 July 2017

1 reference

27 July 2017

volume

10

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27 July 2017

page(s)

405

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describes a project that uses

27 July 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

WGCNA

object named as

WGCNA R package

WGCNA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

WGCNA

0 references

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants

21 June 2018

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Genetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis

21 June 2018

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Amyotrophic lateral sclerosis: an emerging era of collaborative gene discovery

21 June 2018

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A set of genes previously implicated in the hypoxia response might be an important modulator in the rat ear tissue response to mechanical stretch

21 June 2018

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21 June 2018

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Gene expression profiling of long-lived dwarf mice: longevity-associated genes and relationships with diet, gender and aging

21 June 2018

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ITPR2 as a susceptibility gene in sporadic amyotrophic lateral sclerosis: a genome-wide association study

21 June 2018

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Microarray analysis of the cellular pathways involved in the adaptation to and progression of motor neuron injury in the SOD1 G93A mouse model of familial ALS.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Genome-wide association study identifies novel breast cancer susceptibility loci

21 June 2018

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Genome-wide expression profiling of lymphoblastoid cell lines distinguishes different forms of autism and reveals shared pathways

21 June 2018

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Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data

21 June 2018

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21 June 2018

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21 June 2018

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Molecular markers of early Parkinson's disease based on gene expression in blood

21 June 2018

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Gene expression profiling toward understanding of ALS pathogenesis

21 June 2018

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Conservation and evolution of gene coexpression networks in human and chimpanzee brains

21 June 2018

1 reference

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Analysis of oncogenic signaling networks in glioblastoma identifies ASPM as a molecular target

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Transcriptional profiling of Alzheimer blood mononuclear cells by microarray

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Integrating genetic and network analysis to characterize genes related to mouse weight

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Cell death pathways differ in several mouse models with motoneurone disease: analysis of pure motoneurone populations at a presymptomatic age.

21 June 2018

1 reference

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21 June 2018

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A general framework for weighted gene co-expression network analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Chronic activation in presymptomatic amyotrophic lateral sclerosis (ALS) mice of a feedback loop involving Fas, Daxx, and FasL.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

No widespread induction of cell death genes occurs in pure motoneurons in an amyotrophic lateral sclerosis mouse model.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Genome-wide expression profiling of human blood reveals biomarkers for Huntington's disease.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Molecular and cellular pathways of neurodegeneration in motor neurone disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Gene expression profile of spinal motor neurons in sporadic amyotrophic lateral sclerosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

DAXX interacts with heat shock factor 1 during stress activation and enhances its transcriptional activity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

A gene-coexpression network for global discovery of conserved genetic modules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

A new familial amyotrophic lateral sclerosis locus on chromosome 16q12.1-16q12.2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

DAVID: Database for Annotation, Visualization, and Integrated Discovery

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Hierarchical organization of modularity in metabolic networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Transitive functional annotation by shortest-path analysis of gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

The gene encoding alsin, a protein with three guanine-nucleotide exchange factor domains, is mutated in a form of recessive amyotrophic lateral sclerosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Differential expression of 14 genes in amyotrophic lateral sclerosis spinal cord detected using gridded cDNA arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Bax and Bcl-2 interaction in a transgenic mouse model of familial amyotrophic lateral sclerosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Spinal cord mRNA profile in patients with ALS: comparison with transgenic mice expressing the human SOD-1 mutant.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Chromosomal profiles of gene expression in Huntington's disease

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

A genome-wide association study of sporadic ALS in a homogenous Irish population.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Differential expression of genes in amyotrophic lateral sclerosis revealed by profiling the post mortem cortex

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Network neighborhood analysis with the multi-node topological overlap measure

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Induction of multiple heat shock proteins and neuroprotection in a primary culture model of familial amyotrophic lateral sclerosis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Molecular signature of late-stage human ALS revealed by expression profiling of postmortem spinal cord gray matter

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Blood genomic responses differ after stroke, seizures, hypoglycemia, and hypoxia: blood genomic fingerprints of disease

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

El Escorial World Federation of Neurology criteria for the diagnosis of amyotrophic lateral sclerosis. Subcommittee on Motor Neuron Diseases/Amyotrophic Lateral Sclerosis of the World Federation of Neurology Research Group on Neuromuscular Diseases a

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Role of mitochondria in kainate-induced fast Ca2+ transients in cultured spinal motor neurons

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

Integrative genetic analysis of transcription modules: towards filling the gap between genetic loci and inherited traits

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2743717

DPP6 gene variability confers increased risk of developing sporadic amyotrophic lateral sclerosis in Italian patients

31 October 2018

1 reference

12 December 2020

[Skin changes in amyotrophic lateral sclerosis]

1 reference

12 December 2020

Gene profiling of skeletal muscle in an amyotrophic lateral sclerosis mouse model

1 reference

12 December 2020

Spinal cord molecular profiling provides a better understanding of amyotrophic lateral sclerosis pathogenesis

1 reference

12 December 2020

Alterations in anti-oxidative defence enzymes in erythrocytes from sporadic amyotrophic lateral sclerosis (SALS) and familial ALS patients

1 reference

12 December 2020

Differential expression of inflammation- and apoptosis-related genes in spinal cords of a mutant SOD1 transgenic mouse model of familial amyotrophic lateral sclerosis

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-10-405

1 reference

Dimensions Publication ID

27 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-405

9 September 2019

1 reference

27 July 2017

1 reference