(Q33501472)

27 July 2017

The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea. (English)

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27 July 2017

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Dinoroseobacter shibae

Dinoroseobacter shibae

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inferred from title

whole genome sequencing

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9

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27 July 2017

17

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27 July 2017

16

Hans-Peter Klenk

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Erko Stackebrandt

28

Erko Stackebrandt

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Hajnalka Kiss

15

Hajnalka Kiss

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27 July 2017

2

Britta Ballhausen

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Irene Wagner-Döbler

1

Irene Wagner-Döbler

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27 July 2017

7

Heribert Cypionka

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27 July 2017

Antje Wichels

35

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Heiko Liesegang

Heiko Liesegang

19

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Boyke Bunk

Boyke Bunk

6

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Gunnar Gerdts

Gunnar Gerdts

10

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Wolfgang Liebl

Wolfgang Liebl

18

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Rolf Daniel

Rolf Daniel

8

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Dieter Jahn

Dieter Jahn

13

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Amrita Pati

21

Amrita Pati

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27 July 2017

12

Cliff Han

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27 July 2017

26

Rüdiger Pukall

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27 July 2017

24

Claudia Pommerenke

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27 July 2017

32

Jürgen Tomasch

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27 July 2017

25

Silke Pradella

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27 July 2017

4

Thorsten Brinkhoff

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27 July 2017

37

Meinhard Simon

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27 July 2017

20

Linda Meincke

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27 July 2017

22

Jörn Petersen

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27 July 2017

27

Ralf Rabus

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27 July 2017

Britta Ballhausen

2

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27 July 2017

Martine Berger

3

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27 July 2017

Ina Buchholz

5

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27 July 2017

Sarah Hahnke

11

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27 July 2017

Daniela Kalhoefer

14

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27 July 2017

Tanja Piekarski

23

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27 July 2017

Sebastian Thole

29

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27 July 2017

Linda Thompson

30

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27 July 2017

Petra Tielen

31

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27 July 2017

Mathias von Jan

33

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27 July 2017

Nittaya Wanphrut

34

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27 July 2017

Hajo Zech

36

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27 July 2017

10 September 2009

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27 July 2017

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27 July 2017

4

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27 July 2017

61-77

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27 July 2017

1

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https://scigraph.springernature.com/pub.10.1038/ismej.2009.94

27 July 2017

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cites work

Basic local alignment search tool

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

21 January 2018

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TRAP transporters: a new family of periplasmic solute transport systems encoded by the dctPQM genes of Rhodobacter capsulatus and by homologs in diverse gram-negative bacteria

21 January 2018

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Consed: a graphical tool for sequence finishing

21 January 2018

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TRAP transporters: an ancient family of extracytoplasmic solute-receptor-dependent secondary active transporters

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

Structural genes for thiamine biosynthetic enzymes (thiCEFGH) in Escherichia coli K-12

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

Yessotoxins in Norwegian blue mussels (Mytilus edulis): uptake from Protoceratium reticulatum, metabolism and depuration.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Bacterial community associated with Pfiesteria-like dinoflagellate cultures.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Aerobic anoxygenic photosynthesis in Roseobacter clade bacteria from diverse marine habitats

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The Ecological Role of Water-Column Microbes in the Sea

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Dinoroseobacter shibae gen. nov., sp. nov., a new aerobic phototrophic bacterium isolated from dinoflagellates

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Occurrence and expression of gene transfer agent genes in marine bacterioplankton

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Antibiotic production by a Roseobacter clade-affiliated species from the German Wadden Sea and its antagonistic effects on indigenous isolates

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Diversity, ecology, and genomics of the Roseobacter clade: a short overview.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Ecology, inhibitory activity, and morphogenesis of a marine antagonistic bacterium belonging to the Roseobacter clade.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Global-scale processes with a nanoscale drive: the role of marine viruses.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Overview of the marine roseobacter lineage

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

AHL-driven quorum-sensing circuits: their frequency and function among the Proteobacteria

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Induction of multiple prophages from a marine bacterium: a genomic approach

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Algae acquire vitamin B12 through a symbiotic relationship with bacteria

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Major viral impact on the functioning of benthic deep-sea ecosystems

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Long-term anaerobic survival of the opportunistic pathogen Pseudomonas aeruginosa via pyruvate fermentation

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Base-calling of automated sequencer traces using phred. II. Error probabilities

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Marine viruses and their biogeochemical and ecological effects

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Metabolic fluxes in the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis, two members of the marine Roseobacter clade

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Genetic dissection of tropodithietic acid biosynthesis by marine roseobacters

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Opinion: Re-evaluating prokaryotic species

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Microbial community diversity in the phycosphere of natural populations of the toxic alga, Alexandrium fundyense.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Regulation of motility by the ExpR/Sin quorum-sensing system in Sinorhizobium meliloti

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Bacterial taxa that limit sulfur flux from the ocean.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The circle is broken: telomere resolution in linear replicons

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Biosensor determination of the microscale distribution of nitrate, nitrate assimilation, nitrification, and denitrification in a diatom-inhabited freshwater sediment

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

ARB: a software environment for sequence data

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Characterization of the Sinorhizobium meliloti sinR/sinI locus and the production of novel N-acyl homoserine lactones

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Microbial production of vitamin B12

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Cultivation and ecosystem role of a marine roseobacter clade-affiliated cluster bacterium

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Identification and characterization of a novel vitamin B12 (cobalamin) biosynthetic enzyme (CobZ) from Rhodobacter capsulatus, containing flavin, heme, and Fe-S cofactors

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Microbial linear plasmids

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Dimethylsulfoniopropionate metabolism by Pfiesteria-associated Roseobacter spp

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Motility is involved in Silicibacter sp. TM1040 interaction with dinoflagellates

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Chemotaxis of Silicibacter sp. strain TM1040 toward dinoflagellate products.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Ecological genomics of marine Roseobacters

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Resourceful heterotrophs make the most of light in the coastal ocean

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

1 reference

7 January 2021

Genetic diversity of marine Synechococcus and co-occurring cyanophage communities: evidence for viral control of phytoplankton.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Tripartite ATP-independent periplasmic transporters: application of a relational database for genome-wide analysis of transporter gene frequency and organization

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

[Molecular ecology of microalgal viruses].

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Metagenomics and the global ocean survey: what's in it for us, and why should we care?

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

A survey of epiphytic dinoflagellates from the coastal waters of the island of Hawai‘i

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Imaging oxygen distribution in marine sediments. The importance of bioturbation and sediment heterogeneity.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Genome organization and localization of the pufLM genes of the photosynthesis reaction center in phylogenetically diverse marine Alphaproteobacteria

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Bacteria of the Genus Roseobacter Associated with the Toxic Dinoflagellate Prorocentrum lima.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The species concept for prokaryotes

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Cobalamin (coenzyme B12): synthesis and biological significance

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Biosynthesis of cobalamin (vitamin B(12)).

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

An improved protocol for quantification of freshwater Actinobacteria by fluorescence in situ hybridization

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

A newly discovered Roseobacter cluster in temperate and polar oceans

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

CAMERA: a community resource for metagenomics

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Environmental biology of the marine Roseobacter lineage

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Discovery of complex mixtures of novel long-chain quorum sensing signals in free-living and host-associated marine alphaproteobacteria

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Nutrients, Signals, and Photosynthate Release by Symbiotic Algae (The Impact of Taurine on the Dinoflagellate Alga Symbiodinium from the Sea Anemone Aiptasia pulchella)

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The biosynthesis of adenosylcobalamin (vitamin B12)

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Ecology of prokaryotic viruses

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Dimethylsulfoniopropionate: its sources, role in the marine food web, and biological degradation to dimethylsulfide

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.94

7 January 2021

Identifiers

DOI

10.1038/ISMEJ.2009.94

1 reference

Dimensions Publication ID

27 July 2017

0 references

1 reference