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Proteomics data repositories
scientific article published in October 2009
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
review article
1 reference
stated in
Europe PubMed Central
title
Proteomics data repositories
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
main subject
data library
1 reference
based on heuristic
inferred from title
author
Michael Riffle
object named as
Michael Riffle
series ordinal
1
0 references
Jimmy K. Eng
series ordinal
2
object named as
Jimmy K Eng
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
publication date
1 October 2009
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
published in
Proteomics
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
volume
9
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
page(s)
4653-4663
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
issue
20
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
cites work
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Optimization and testing of mass spectral library search algorithms for compound identification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Prediction of high-responding peptides for targeted protein assays by mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
FlyBase: enhancing Drosophila Gene Ontology annotations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
mzML: a single, unifying data format for mass spectrometer output
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Human Proteinpedia enables sharing of human protein data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The HGNC Database in 2008: a resource for the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Development and validation of a spectral library searching method for peptide identification from MS/MS.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Analysis of peptide MS/MS spectra from large-scale proteomics experiments using spectrum libraries
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Using annotated peptide mass spectrum libraries for protein identification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Using the global proteome machine for protein identification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
A uniform proteomics MS/MS analysis platform utilizing open XML file formats
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
PRIDE: a public repository of protein and peptide identifications for the proteomics community
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The PeptideAtlas project
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
BioGRID: a general repository for interaction datasets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
PRIDE: the proteomics identifications database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The use of proteotypic peptide libraries for protein identification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The Yeast Resource Center Public Data Repository
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The Universal Protein Resource (UniProt)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
A common open representation of mass spectrometry data and its application to proteomics research
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The International Protein Index: an integrated database for proteomics experiments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
TANDEM: matching proteins with tandem mass spectra
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
GeneDB: a resource for prokaryotic and eukaryotic organisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
A statistical model for identifying proteins by tandem mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Functional organization of the yeast proteome by systematic analysis of protein complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
MIPS: a database for genomes and protein sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Mobile and localized protons: a framework for understanding peptide dissociation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
WormBase: network access to the genome and biology of Caenorhabditis elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Evaluation of electrospray transport CID for the generation of searchable libraries
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Gene ontology: tool for the unification of biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Introducing RefSeq and LocusLink: curated human genome resources at the NCBI.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
Probability-based protein identification by searching sequence databases using mass spectrometry data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
DIP: the database of interacting proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
The critical evaluation of a comprehensive mass spectral library
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
SGD: Saccharomyces Genome Database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
21 June 2018
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
31 October 2018
Computational prediction of proteotypic peptides for quantitative proteomics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
31 October 2018
A computational approach toward label-free protein quantification using predicted peptide detectability.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
31 October 2018
Prediction of low-energy collision-induced dissociation spectra of peptides
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
31 October 2018
Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
31 October 2018
Second Proteomics Standards Initiative Spring Workshop
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908408
retrieved
31 October 2018
Identifiers
DOI
10.1002/PMIC.200900216
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
PMCID
2908408
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
PubMed ID
19795424
1 reference
stated in
Europe PubMed Central
PubMed ID
19795424
retrieved
27 July 2017
ResearchGate publication ID
26861893
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