(Q33517423)

27 July 2017

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title

Dealing with missing values in large-scale studies: microarray data imputation and beyond. (English)

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27 July 2017

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Tero Aittokallio

1

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publication date

4 December 2009

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Briefings in Bioinformatics

27 July 2017

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27 July 2017

11

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27 July 2017

2

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27 July 2017

253-264

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Review: a gentle introduction to imputation of missing values

27 July 2017

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Exploring the metabolic and genetic control of gene expression on a genomic scale

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Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

21 January 2018

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Influence of microarrays experiments missing values on the stability of gene groups by hierarchical clustering

21 January 2018

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Gaussian mixture clustering and imputation of microarray data

21 January 2018

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DNA microarray data imputation and significance analysis of differential expression

21 January 2018

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The influence of missing value imputation on detection of differentially expressed genes from microarray data

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Effects of replacing the unreliable cDNA microarray measurements on the disease classification based on gene expression profiles and functional modules.

21 January 2018

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Missing value estimation methods for DNA microarrays

21 January 2018

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Missing-value estimation using linear and non-linear regression with Bayesian gene selection.

21 January 2018

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LSimpute: accurate estimation of missing values in microarray data with least squares methods

21 January 2018

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Dealing with gene expression missing data

21 January 2018

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Missing value estimation for DNA microarray gene expression data: local least squares imputation

21 January 2018

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Missing value estimation for DNA microarray gene expression data by Support Vector Regression imputation and orthogonal coding scheme

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A Bayesian missing value estimation method for gene expression profile data

21 January 2018

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Reuse of imputed data in microarray analysis increases imputation efficiency

21 January 2018

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Sequential imputation for missing values.

21 January 2018

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Sequential local least squares imputation estimating missing value of microarray data

21 January 2018

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Iterated local least squares microarray missing value imputation.

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Improving cluster-based missing value estimation of DNA microarray data

21 January 2018

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Collateral missing value imputation: a new robust missing value estimation algorithm for microarray data

21 January 2018

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Ameliorative missing value imputation for robust biological knowledge inference

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Quality determination and the repair of poor quality spots in array experiments

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Robust data imputation

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Continuous representations of time-series gene expression data

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Using hidden Markov models to analyze gene expression time course data

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Two-pass imputation algorithm for missing value estimation in gene expression time series.

21 January 2018

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Autoregressive-model-based missing value estimation for DNA microarray time series data

21 January 2018

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Timing of gene expression responses to environmental changes

21 January 2018

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Improving missing value estimation in microarray data with gene ontology

21 January 2018

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Missing value imputation for microarray gene expression data using histone acetylation information

21 January 2018

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Integrative missing value estimation for microarray data

21 January 2018

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A meta-data based method for DNA microarray imputation

21 January 2018

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Microarray missing data imputation based on a set theoretic framework and biological knowledge

21 January 2018

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Missing value imputation improves clustering and interpretation of gene expression microarray data

21 January 2018

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Comparison of Affymetrix GeneChip expression measures.

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Significance analysis of microarray for relative quantitation of LC/MS data in proteomics

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A statistical framework for protein quantitation in bottom-up MS-based proteomics.

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Integrative analysis of transcriptomic and proteomic data of Desulfovibrio vulgaris: a non-linear model to predict abundance of undetected proteins

21 January 2018

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Significance analysis of microarrays applied to the ionizing radiation response

21 January 2018

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A primordial RNA modification enzyme: the case of tRNA (m1A) methyltransferase

21 January 2018

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DAnTE: a statistical tool for quantitative analysis of -omics data.

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Deciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction Partners

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An optimized predictive strategy for interactome mapping

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Cost-effective strategies for completing the interactome

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Practical aspects of imputation-driven meta-analysis of genome-wide association studies

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A comprehensive evaluation of SNP genotype imputation

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Accounting for one-channel depletion improves missing value imputation in 2-dye microarray data

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21 January 2018

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pcaMethods--a bioconductor package providing PCA methods for incomplete data

21 January 2018

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Constrained mixture estimation for analysis and robust classification of clinical time series

21 January 2018

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21 January 2018

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A multi-stage approach to clustering and imputation of gene expression profiles.

21 January 2018

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An ensemble approach to microarray data-based gene prioritization after missing value imputation

21 January 2018

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Identifiers

DOI

10.1093/BIB/BBP059

1 reference

journals/bib/Aittokallio10

27 July 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

19965979