(Q33518206)

27 July 2017

Learning rates and states from biophysical time series: a Bayesian approach to model selection and single-molecule FRET data (English)

1 reference

27 July 2017

2

Jingyi Fei

1 reference

27 July 2017

Jonathan E Bronson

1

1 reference

27 July 2017

Jake M Hofman

series ordinal

3

1 reference

27 July 2017

Ruben L Gonzalez

series ordinal

4

1 reference

27 July 2017

Chris H Wiggins

series ordinal

5

1 reference

27 July 2017

language of work or name

English

0 references

publication date

1 December 2009

1 reference

27 July 2017

1 reference

27 July 2017

97

1 reference

27 July 2017

12

1 reference

27 July 2017

3196-3205

1 reference

Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation

27 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Direct Determination of Kinetic Rates from Single-Molecule Photon Arrival Trajectories Using Hidden Markov Models.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Translation factors direct intrinsic ribosome dynamics during translation termination and ribosome recycling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Following movement of the L1 stalk between three functional states in single ribosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Intersubunit coordination in a homomeric ring ATPase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Structure of ratcheted ribosomes with tRNAs in hybrid states

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Spontaneous intersubunit rotation in single ribosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

A practical guide to single-molecule FRET

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Advances in single-molecule fluorescence methods for molecular biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Protein folding studied by single-molecule FRET.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Probing the chemistry of thioredoxin catalysis with force

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Fluctuations of transfer RNAs between classical and hybrid states

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Identification of two distinct hybrid state intermediates on the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Analysis of single-molecule FRET trajectories using hidden Markov modeling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Multiple events on single molecules: unbiased estimation in single-molecule biophysics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

tRNA dynamics on the ribosome during translation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Kinesin walks hand-over-hand

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Correlating structural dynamics and function in single ribozyme molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

A direct optimization approach to hidden Markov modeling for single channel kinetics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Intermediate states in the movement of transfer RNA in the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Variational Bayes for continuous hidden Markov models and its application to active learning

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Repetitive shuttling of a motor protein on DNA.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Maximum likelihood estimation of aggregated Markov processes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2793368

Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20006957

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A Single-Molecule Study of RNA Catalysis and Folding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20006957

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.BPJ.2009.09.031

1 reference

27 July 2017

1 reference

1 reference

27 July 2017

1 reference