(Q33518414)

27 July 2017

Transduction of RNA-directed DNA methylation signals to repressive histone marks in Arabidopsis thaliana (English)

1 reference

27 July 2017

0 references

0 references

Akihiro Matsui

3

0 references

Motoaki Seki

object named as

Motoaki Seki

11

0 references

Kazuo Shinozaki

object named as

Kazuo Shinozaki

9

0 references

Tetsurō Toyoda

10

object named as

Tetsuro Toyoda

1 reference

27 July 2017

6

Junko Ishida

1 reference

27 July 2017

7

Yoshiki Mochizuki

1 reference

27 July 2017

2

Jong-Myong Kim

1 reference

27 July 2017

5

Taeko Morosawa

1 reference

27 July 2017

13

Yoshiki Habu

1 reference

27 July 2017

Hisataka Numa

1

1 reference

27 July 2017

Yukio Kurihara

4

1 reference

27 July 2017

Hiroshi Kimura

8

1 reference

27 July 2017

Manabu Yoshikawa

12

1 reference

27 July 2017

language of work or name

English

0 references

publication date

10 December 2009

1 reference

27 July 2017

1 reference

27 July 2017

29

1 reference

27 July 2017

2

1 reference

27 July 2017

352-362

1 reference

A stepwise pathway for biogenesis of 24-nt secondary siRNAs and spreading of DNA methylation

27 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Analyzing real-time PCR data by the comparative C(T) method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Roles of RNA polymerase IV in gene silencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

The organization of histone H3 modifications as revealed by a panel of specific monoclonal antibodies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Transcription and RNA interference in the formation of heterochromatin.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Transposable elements and the epigenetic regulation of the genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Role of RNA polymerase IV in plant small RNA metabolism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Genome-wide profiling and analysis of Arabidopsis siRNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

MOM1 mediates DNA-methylation-independent silencing of repetitive sequences in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Epigenetic regulation of transcription in intermediate heterochromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Post-transcriptional small RNA pathways in plants: mechanisms and regulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Tiling array-driven elucidation of transcriptional structures based on maximum-likelihood and Markov models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

RNAi-mediated pathways in the nucleus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

ASRP: the Arabidopsis Small RNA Project Database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Role of transposable elements in heterochromatin and epigenetic control

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Genetic and functional diversification of small RNA pathways in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Mi-2/NuRD: multiple complexes for many purposes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Effects of recombination rate and gene density on transposable element distributions in Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Heterochromatin in interphase nuclei of Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Two regulatory levels of transcriptional gene silencing in Arabidopsis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Depletion of MOM1 in non-dividing cells of Arabidopsis plants releases transcriptional gene silencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

RNA-directed DNA methylation in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Rolling-circle transposons in eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Molecular paleontology of transposable elements from Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Endogenous targets of transcriptional gene silencing in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

DNA regions flanking the major Arabidopsis thaliana satellite are principally enriched in Athila retroelement sequences.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824457

Disruption of the plant gene MOM releases transcriptional silencing of methylated genes

21 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

Transcriptional scaffolds for heterochromatin assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

The SRA methyl-cytosine-binding domain links DNA and histone methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

Atypical RNA polymerase subunits required for RNA-directed DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

The maize genome contains a helitron insertion

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2009.374

Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region

21 January 2018

1 reference

12 December 2020

The complete sequence of a heterochromatic island from a higher eukaryote. The Cold Spring Harbor Laboratory, Washington University Genome Sequencing Center, and PE Biosystems Arabidopsis Sequencing Consortium

1 reference

12 December 2020

Two means of transcriptional reactivation within heterochromatin

1 reference

12 December 2020

Arabidopsis thaliana DNA methylation mutants

1 reference

12 December 2020

Identification of the candidate genes regulated by RNA-directed DNA methylation in Arabidopsis

1 reference

12 December 2020

Identifiers

DOI

10.1038/EMBOJ.2009.374

1 reference

27 July 2017

1 reference

27 July 2017

1 reference