(Q33524541)

27 July 2017

title

New insights into two distinct nucleosome distributions: comparison of cross-platform positioning datasets in the yeast genome. (English)

1 reference

27 July 2017

1 reference

Jihua Feng

1

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27 July 2017

Xianhua Dai

2

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27 July 2017

Qian Xiang

3

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27 July 2017

Zhiming Dai

4

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27 July 2017

Jiang Wang

5

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27 July 2017

Yangyang Deng

6

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27 July 2017

Caisheng He

7

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27 July 2017

language of work or name

English

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publication date

15 January 2010

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27 July 2017

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27 July 2017

volume

11

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27 July 2017

page(s)

33

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Nucleosome positioning and gene regulation: advances through genomics

27 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

21 June 2018

1 reference

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A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Two strategies for gene regulation by promoter nucleosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

21 June 2018

1 reference

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Chromatin remodelling at promoters suppresses antisense transcription

21 June 2018

1 reference

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Nucleosome destabilization in the epigenetic regulation of gene expression

21 June 2018

1 reference

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A high-resolution atlas of nucleosome occupancy in yeast

21 June 2018

1 reference

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Nucleosome positioning signals in genomic DNA

21 June 2018

1 reference

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The pattern and evolution of yeast promoter bendability

21 June 2018

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Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

21 June 2018

1 reference

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The role of chromatin during transcription

21 June 2018

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Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection.

21 June 2018

1 reference

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Genome-wide patterns of histone modifications in yeast.

21 June 2018

1 reference

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A genomic code for nucleosome positioning

21 June 2018

1 reference

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Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

21 June 2018

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A high-resolution map of transcription in the yeast genome

21 June 2018

1 reference

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Assembly and disassembly of nucleosome core particles containing histone variants by human nucleosome assembly protein I.

21 June 2018

1 reference

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Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Genome-wide map of nucleosome acetylation and methylation in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Single-nucleosome mapping of histone modifications in S. cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Genome-scale identification of nucleosome positions in S. cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Global nucleosome occupancy in yeast

21 June 2018

1 reference

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Nucleosome sliding: facts and fiction

21 June 2018

1 reference

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Genomic expression programs in the response of yeast cells to environmental changes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Dissecting the regulatory circuitry of a eukaryotic genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Sequence specific cleavage of DNA by micrococcal nuclease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Post-transcriptional expression regulation in the yeast Saccharomyces cerevisiae on a genomic scale.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Evidence for nucleosome depletion at active regulatory regions genome-wide

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Identification and distinct regulation of yeast TATA box-containing genes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

ATP-dependent histone octamer sliding mediated by the chromatin remodeling complex NURF.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Dynamics of Replication-Independent Histone Turnover in Budding Yeast

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2824721

Another potential artifact in the study of nucleosome phasing by chromatin digestion with micrococcal nuclease

31 October 2018

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12 December 2020

Nature of the nucleosomal barrier to RNA polymerase II

1 reference

12 December 2020

Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast

1 reference

12 December 2020

Nucleosome positions predicted through comparative genomics

1 reference

12 December 2020

A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription

1 reference

12 December 2020

Nucleosome positioning determinants

1 reference

12 December 2020

The conformation dependent hydrolysis of DNA by micrococcal nuclease

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-11-33

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Dimensions Publication ID

27 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-33

9 September 2019

1 reference

27 July 2017

1 reference