(Q33585023)

English

Soil type-dependent responses to phenanthrene as revealed by determining the diversity and abundance of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes by using a novel PCR detection system

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

Soil type-dependent responses to phenanthrene as revealed by determining the diversity and abundance of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes by using a novel PCR detection system (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

polycyclic aromatic hydrocarbons

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based on heuristic

inferred from title

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Ingrid Kögel-Knabner

7

object named as

Ingrid Kögel-Knabner

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

object named as

Guo-Chun Ding

1

0 references

Geertje Johanna Pronk

object named as

Geertje Johanna Pronk

5

0 references

object named as

Holger Heuer

2

0 references

6

object named as

Katja Heister

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Kornelia Smalla

8

object named as

Kornelia Smalla

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Michael Spiteller

4

object named as

Michael Spiteller

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

author name string

Sebastian Zühlke

3

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

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publication date

21 May 2010

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

76

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

14

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

4765-4771

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Diversity, abundance, and consistency of microbial oxygenase expression and biodegradation in a shallow contaminated aquifer

1 reference

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21 June 2018

Diversity of ring-hydroxylating dioxygenases in pristine and oil contaminated microbial mats at genomic and transcriptomic levels.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Surface motility of polycyclic aromatic hydrocarbon (PAH)-degrading mycobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Novel aromatic ring-hydroxylating dioxygenase genes from coastal marine sediments of Patagonia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Diversity of ndo genes in mangrove sediments exposed to different sources of polycyclic aromatic hydrocarbon pollution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Spatial distribution of sponge-associated bacteria in the Mediterranean sponge Tethya aurantium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Microbial dioxygenase gene population shifts during polycyclic aromatic hydrocarbon biodegradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Effects of the inoculant strain Pseudomonas putida KT2442 (pNF142) and of naphthalene contamination on the soil bacterial community

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Isolation of soil bacteria adapted to degrade humic acid-sorbed phenanthrene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Principles of microbial PAH-degradation in soil.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Genetics of Polycyclic Aromatic Hydrocarbon Metabolism in Diverse Aerobic Bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Biodegradation of high-molecular-weight polycyclic aromatic hydrocarbons by bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

In situ, real-time catabolic gene expression: extraction and characterization of naphthalene dioxygenase mRNA transcripts from groundwater.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

21 June 2018

Microbial community structure and biodegradation activity of particle-associated bacteria in a coal tar contaminated creek.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar-contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Occurrence and diversity of naphthalene dioxygenase genes in soil microbial communities from the Maritime Antarctic

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Genomic analysis of polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Real-Time PCR quantification of PAH-ring hydroxylating dioxygenase (PAH-RHDalpha) genes from Gram positive and Gram negative bacteria in soil and sediment samples.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Genetic diversity of dioxygenase genes in polycyclic aromatic hydrocarbon-degrading bacteria isolated from mangrove sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Distribution of the Mycobacterium community and polycyclic aromatic hydrocarbons (PAHs) among different size fractions of a long-term PAH-contaminated soil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Numerical and genetic analysis of polycyclic aromatic hydrocarbon-degrading mycobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

The adaptation of two similar soils to pyrene catabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

A simple (14)C-respirometric method for assessing microbial catabolic potential and contaminant bioavailability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Bacterial diversity of soils assessed by DGGE, T-RFLP and SSCP fingerprints of PCR-amplified 16S rRNA gene fragments: Do the different methods provide similar results?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2901735

31 October 2018

Degradation of pyrene by Mycobacterium flavescens

1 reference

https://pubmed.ncbi.nlm.nih.gov/20495045

12 December 2020

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Identifiers

10.1128/AEM.00047-10

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

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