(Q33592278)

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Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis (English)

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Europe PubMed Central

PubMed publication ID

28 July 2017

multiple drug resistance

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Mary Kearney

2

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Scott M. Hammer

12

object named as

Scott Hammer

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Europe PubMed Central

PubMed publication ID

28 July 2017

Frank Maldarelli

3

object named as

Frank Maldarelli

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Europe PubMed Central

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28 July 2017

14

object named as

John M Coffin

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28 July 2017

13

object named as

John W Mellors

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28 July 2017

1

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Sarah Palmer

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28 July 2017

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Elias K Halvas

4

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Europe PubMed Central

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28 July 2017

Christian J Bixby

5

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28 July 2017

Holly Bazmi

6

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Europe PubMed Central

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28 July 2017

Diane Rock

7

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Europe PubMed Central

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28 July 2017

Judith Falloon

8

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Europe PubMed Central

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28 July 2017

Richard T Davey

9

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Europe PubMed Central

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28 July 2017

Robin L Dewar

10

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28 July 2017

Julia A Metcalf

11

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28 July 2017

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publication date

1 January 2005

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Europe PubMed Central

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28 July 2017

Journal of Clinical Microbiology

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Europe PubMed Central

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28 July 2017

43

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Europe PubMed Central

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28 July 2017

1

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Europe PubMed Central

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28 July 2017

406-413

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Low frequency nonnucleoside reverse-transcriptase inhibitor-resistant variants contribute to failure of efavirenz-containing regimens in treatment- experienced patients

1 reference

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21 June 2018

Role of minority populations of human immunodeficiency virus type 1 in the evolution of viral resistance to protease inhibitors.

1 reference

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21 June 2018

Detection of drug-resistant minority variants of HIV-1 during virologic failure of indinavir, lamivudine, and zidovudine

1 reference

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21 June 2018

HIV resistance testing. A clinical tool

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21 June 2018

HIV sequence databases

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21 June 2018

Multiple sequence alignment with the Clustal series of programs

1 reference

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21 June 2018

Retroviral mutation rates and reverse transcriptase fidelity

1 reference

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21 June 2018

Virus population homogenization following acute human immunodeficiency virus type 1 infection

1 reference

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21 June 2018

Molecular basis of fidelity of DNA synthesis and nucleotide specificity of retroviral reverse transcriptases

1 reference

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21 June 2018

Reappearance of HIV multidrug-resistance in plasma and circulating lymphocytes after reintroduction of antiretroviral therapy

1 reference

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21 June 2018

Changes in human immunodeficiency virus type 1 populations after treatment interruption in patients failing antiretroviral therapy.

1 reference

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21 June 2018

Clinical and laboratory guidelines for the use of HIV-1 drug resistance testing as part of treatment management: recommendations for the European setting. The EuroGUidelines Group for HIV resistance

1 reference

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21 June 2018

Human immunodeficiency virus type 1 mutations selected in patients failing efavirenz combination therapy

1 reference

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21 June 2018

The relation between baseline HIV drug resistance and response to antiretroviral therapy: re-analysis of retrospective and prospective studies using a standardized data analysis plan.

1 reference

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21 June 2018

A strategy for cloning infectious molecular clones of retroviruses from serum or plasma

1 reference

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21 June 2018

Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

Human immunodeficiency virus type 1 protease genotypes and in vitro protease inhibitor susceptibilities of isolates from individuals who were switched to other protease inhibitors after long-term saquinavir treatment

1 reference

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21 June 2018

Antiretroviral therapy for HIV infection in 1997. Updated recommendations of the International AIDS Society-USA panel

1 reference

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21 June 2018

Genetic correlates of in vivo viral resistance to indinavir, a human immunodeficiency virus type 1 protease inhibitor

1 reference

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21 June 2018

Nevirapine-resistant human immunodeficiency virus: kinetics of replication and estimated prevalence in untreated patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

Independent evolution of the env and pol genes of HIV-1 during zidovudine therapy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

Pol gene quasispecies of human immunodeficiency virus: mutations associated with drug resistance in virus from patients undergoing no drug therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

In vivo emergence of HIV-1 variants resistant to multiple protease inhibitors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540111

21 June 2018

Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase

1 reference

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21 June 2018

Nevirapine resistance mutations of human immunodeficiency virus type 1 selected during therapy

1 reference

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21 June 2018

The accuracy of reverse transcriptase from HIV-1.

1 reference

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21 June 2018

Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1

1 reference

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21 June 2018

Detection, quantification and sequencing of HIV-1 from the plasma of seropositive individuals and from factor VIII concentrates

1 reference

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21 June 2018

Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient

1 reference

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21 June 2018

Emergence of minor populations of human immunodeficiency virus type 1 carrying the M184V and L90M mutations in subjects undergoing structured treatment interruptions

1 reference

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30 October 2018

Structured treatment interruption in patients with multidrug-resistant human immunodeficiency virus

1 reference

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30 October 2018

From RNA to quasispecies: a DNA polymerase with proofreading activity is highly recommended for accurate assessment of viral diversity

1 reference

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30 October 2018

Dual vs single protease inhibitor therapy following antiretroviral treatment failure: a randomized trial

1 reference

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30 October 2018

Underestimation of HIV type 1 drug resistance mutations: results from the ENVA-2 genotyping proficiency program.

1 reference

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30 October 2018

Re-occurrence of HIV-1 drug mutations after treatment re-initiation following interruption in patients with multiple treatment failure.

1 reference

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30 October 2018

Virologic and immunologic consequences of discontinuing combination antiretroviral-drug therapy in HIV-infected patients with detectable viremia.

1 reference

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30 October 2018

A randomized study of antiretroviral management based on plasma genotypic antiretroviral resistance testing in patients failing therapy. CPCRA 046 Study Team for the Terry Beirn Community Programs for Clinical Research on AIDS.

1 reference

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30 October 2018

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1 reference

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30 October 2018

Interlaboratory concordance of DNA sequence analysis to detect reverse transcriptase mutations in HIV-1 proviral DNA. ACTG Sequencing Working Group. AIDS Clinical Trials Group.

1 reference

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30 October 2018

Comparative performance of high-density oligonucleotide sequencing and dideoxynucleotide sequencing of HIV type 1 pol from clinical samples.

1 reference

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30 October 2018

Multiple concurrent reverse transcriptase and protease mutations and multidrug resistance of HIV-1 isolates from heavily treated patients

1 reference

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30 October 2018

Evolution of human immunodeficiency virus type 1 envelope sequences in infected individuals with differing disease progression profiles.

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Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization

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Fidelity of HIV-1 reverse transcriptase

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HIV Quasispecies and Resampling

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12 December 2020

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Identifiers

10.1128/JCM.43.1.406-413.2005

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

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