(Q33595529)

28 July 2017

title

The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference (English)

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28 July 2017

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Jeremy M Brown

2

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Kathrin F. Stanger-Hall

object named as

Kathrin Stanger-Hall

series ordinal

3

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Emily Moriarty Lemmon

series ordinal

4

object named as

Emily Moriarty Lemmon

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28 July 2017

1

Alan R Lemmon

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28 July 2017

publication date

1 February 2009

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28 July 2017

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28 July 2017

volume

58

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28 July 2017

issue

1

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28 July 2017

page(s)

130-145

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Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

28 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

The importance of data partitioning and the utility of Bayes factors in Bayesian phylogenetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Predicting the evolution of human influenza A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Comparing bootstrap and posterior probability values in the four-taxon case

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

The supermatrix approach to systematics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Prospects for building the tree of life from large sequence databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Evolutionary trees from DNA sequences: A maximum likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Phylogenies from molecular sequences: inference and reliability

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

MaxAlign: maximizing usable data in an alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

21 January 2018

AIDS. Origins of HIV.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Experimental Phylogenetics: Generation of a Known Phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Fragmentary taxa, missing data, and ambiguity: mistaken assumptions and conclusions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Is there a star tree paradox?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

The importance of proper model assumption in bayesian phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Polytomies and Bayesian phylogenetic inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Phylogenetic mixtures on a single tree can mimic a tree of another topology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Molecular phylogenetics and evolution of host plant use in the Neotropical rolled leaf 'hispine' beetle genus Cephaloleia (Chevrolat) (Chrysomelidae: Cassidinae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Morphological homoplasy, life history evolution, and historical biogeography of plethodontid salamanders inferred from complete mitochondrial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Molecular phylogenetics and the origins of placental mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Phylogenomics of eukaryotes: impact of missing data on large alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Heterotachy and long-branch attraction in phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

MrBayes 3: Bayesian phylogenetic inference under mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Phylogeny of North American fireflies (Coleoptera: Lampyridae): implications for the evolution of light signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Should phylogenetic models be trying to "fit an elephant"?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

The Bayesian "star paradox" persists for long finite sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Does adding characters with missing data increase or decrease phylogenetic accuracy?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Missing data, incomplete taxa, and phylogenetic accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Missing data and the design of phylogenetic analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Fair-balance paradox, star-tree paradox, and Bayesian phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Branch-length prior influences Bayesian posterior probability of phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

The Biasing Effect of Compositional Heterogeneity on Phylogenetic Estimates May be Underestimated

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYP017

Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites

21 January 2018

1 reference

12 December 2020

Heterotachy and tree building: a case study with plastids and eubacteria.

1 reference

12 December 2020

Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation

1 reference

12 December 2020

Likelihood, parsimony, and heterogeneous evolution

1 reference

12 December 2020

EXPERIMENTAL MOLECULAR EVOLUTION OF BACTERIOPHAGE T7.

1 reference

12 December 2020

Exploring the Phylogenetic Structure of Ecological Communities: An Example for Rain Forest Trees

1 reference

12 December 2020

A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates

1 reference

12 December 2020

Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees

1 reference

12 December 2020

Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites

1 reference

12 December 2020

Phylogeny of the SARS coronavirus

1 reference

12 December 2020

Among-site rate variation and phylogenetic analysis of 12S rRNA in sigmodontine rodents

1 reference

12 December 2020

Identifiers

DOI

10.1093/SYSBIO/SYP017

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28 July 2017

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