(Q33604788)

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Built shallow to maintain homeostasis and persistent infection: insight into the transcriptional regulatory network of the gastric human pathogen Helicobacter pylori

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Europe PubMed Central

PubMed publication ID

28 July 2017

3 references

5 September 2020

5 July 2022

29 July 2022

Built shallow to maintain homeostasis and persistent infection: insight into the transcriptional regulatory network of the gastric human pathogen Helicobacter pylori (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Helicobacter infection

3 references

30 June 2019

5 July 2022

29 July 2022

bacterial protein

1 reference

20 November 2019

bacterial gene expression regulation

1 reference

9 August 2020

gene regulatory network

1 reference

5 September 2020

Helicobacter pylori

1 reference

2 November 2019

Helicobacter pylori infectious disease

1 reference

based on heuristic

inferred from title

Alberto Danielli

object named as

Alberto Danielli

1

0 references

Vincenzo Scarlato

object named as

Vincenzo Scarlato

3

0 references

author name string

Gabriele Amore

2

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

10 June 2010

11 references

Europe PubMed Central

PubMed publication ID

28 July 2017

23 March 2019

21 March 2019

30 June 2019

8 September 2019

2 November 2019

20 November 2019

9 August 2020

5 September 2020

5 July 2022

29 July 2022

11 references

Europe PubMed Central

PubMed publication ID

28 July 2017

23 March 2019

21 March 2019

30 June 2019

8 September 2019

2 November 2019

20 November 2019

9 August 2020

5 September 2020

5 July 2022

29 July 2022

6

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

e1000938

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

copyright license

Creative Commons Attribution 4.0 International

10 references

Europe PubMed Central

23 March 2019

Europe PubMed Central

21 March 2019

Europe PubMed Central

30 June 2019

Europe PubMed Central

8 September 2019

Europe PubMed Central

2 November 2019

Europe PubMed Central

20 November 2019

Europe PubMed Central

9 August 2020

Europe PubMed Central

5 September 2020

Europe PubMed Central

5 July 2022

Europe PubMed Central

29 July 2022

copyright status

0 references

on focus list of Wikimedia project

0 references

The primary transcriptome of the major human pathogen Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

A single nucleotide change affects fur-dependent regulation of sodB in H. pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Methods to reconstruct and compare transcriptional regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Screening and identification of natural antisense transcripts in Helicobacter pylori by a novel approach based on RNase I protection assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Posttranscriptional regulation of flagellin synthesis in Helicobacter pylori by the RpoN chaperone HP0958.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

High-affinity Ni2+ binding selectively promotes binding of Helicobacter pylori NikR to its target urease promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Visualization, documentation, analysis, and communication of large-scale gene regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

General trends in the evolution of prokaryotic transcriptional regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Rewiring the specificity of two-component signal transduction systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Specificity in two-component signal transduction pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Interplay between network structures, regulatory modes and sensing mechanisms of transcription factors in the transcriptional regulatory network of E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Transcriptional regulation of stress response and motility functions in Helicobacter pylori is mediated by HspR and HrcA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Metal sensor proteins: nature's metalloregulated allosteric switches.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Ten years after the first Helicobacter pylori genome: comparative and functional genomics provide new insights in the variability and adaptability of a persistent pathogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The N-terminal arm of the Helicobacter pylori Ni2+-dependent transcription factor NikR is required for specific DNA binding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Network motifs: theory and experimental approaches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Gene expression in vivo shows that Helicobacter pylori colonizes an acidic niche on the gastric surface

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Pathogenomics of helicobacter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The orphan response regulator HP1021 of Helicobacter pylori regulates transcription of a gene cluster presumably involved in acetone metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Helicobacter pylori HP1512 is a nickel-responsive NikR-regulated outer membrane protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

NikR mediates nickel-responsive transcriptional repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400) and FrpB4 (HP1512).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Transcriptional regulatory networks in bacteria: from input signals to output responses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

A coherent feed-forward loop with a SUM input function prolongs flagella expression in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Acid-responsive gene regulation in the human pathogen Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Characterization of the ArsRS regulon of Helicobacter pylori, involved in acid adaptation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Involvement of the HP0165-HP0166 two-component system in expression of some acidic-pH-upregulated genes of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Nickel represses the synthesis of the nickel permease NixA of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Iron and pH homeostasis intersect at the level of Fur regulation in the gastric pathogen Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The metal- and DNA-binding activities of Helicobacter pylori NikR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

In vitro analysis of protein-operator interactions of the NikR and fur metal-responsive regulators of coregulated genes in Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The nickel-responsive regulator NikR controls activation and repression of gene transcription in Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The Helicobacter pylori CrdRS two-component regulation system (HP1364/HP1365) is required for copper-mediated induction of the copper resistance determinant CrdA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Stable accumulation of sigma54 in Helicobacter pylori requires the novel protein HP0958.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Iron-responsive regulation of the Helicobacter pylori iron-cofactored superoxide dismutase SodB is mediated by Fur

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Sensing your surroundings: how transcription-regulatory networks of the cell discern environmental signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Helicobacter pylori FlgR is an enhancer-independent activator of sigma54-RNA polymerase holoenzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Fur functions as an activator and as a repressor of putative virulence genes in Neisseria meningitidis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Genome-wide analysis of transcriptional hierarchy and feedback regulation in the flagellar system of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Dual control of Helicobacter pylori heat shock gene transcription by HspR and HrcA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Genetic evidence for histidine kinase HP165 being an acid sensor of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Just-in-time transcription program in metabolic pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Genes of Helicobacter pylori regulated by attachment to AGS cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Growth phase-dependent response of Helicobacter pylori to iron starvation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Structure and function of the feed-forward loop network motif

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Characterization of the roles of NikR, a nickel-responsive pleiotropic autoregulator of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

pH-regulated gene expression of the gastric pathogen Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

How Bacteria Assemble Flagella

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The gastric biology of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Growth phase-dependent regulation of target gene promoters for binding of the essential orphan response regulator HP1043 of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Genome-wide transcriptional profiling in a histidine kinase mutant of Helicobacter pylori identifies members of a regulon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

NikR mediates nickel-responsive transcriptional induction of urease expression in Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The role of motility as a virulence factor in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Characterization of the HspR-mediated stress response in Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Functional characterization of the antagonistic flagellar late regulators FliA and FlgM of Helicobacter pylori and their effects on the H. pylori transcriptome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Network motifs in the transcriptional regulation network of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The Helicobacter pylori homologue of the ferric uptake regulator is involved in acid resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Identification of target genes regulated by the two-component system HP166-HP165 of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Negative regulation of the heat shock response in Streptomyces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Iron-dependent transcription of the frpB gene of Helicobacter pylori is controlled by the Fur repressor protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Regulation of transcription in Helicobacter pylori: simple systems or complex circuits?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Regulation of ferritin-mediated cytoplasmic iron storage by the ferric uptake regulator homolog (Fur) of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Transcriptional analysis of major heat shock genes of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Helicobacter pylori possesses two CheY response regulators and a histidine kinase sensor, CheA, which are essential for chemotaxis and colonization of the gastric mucosa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Motility of Helicobacter pylori is coordinately regulated by the transcriptional activator FlgR, an NtrC homolog

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Cloning and characterization of the fur gene from Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The GroE chaperonin machine is a major modulator of the CIRCE heat shock regulon of Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

The complete genome sequence of the gastric pathogen Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Colonization of gnotobiotic piglets by Helicobacter pylori deficient in two flagellin genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

hrcA, the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Helicobacter pylori infection and gastric lymphoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

A urease-negative mutant of Helicobacter pylori constructed by allelic exchange mutagenesis lacks the ability to colonize the nude mouse stomach.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Unidentified curved bacilli in the stomach of patients with gastritis and peptic ulceration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

21 June 2018

Evolutionary dynamics of prokaryotic transcriptional regulatory networks

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Comparative genomics reveal novel heat shock regulatory mechanisms in Staphylococcus aureus and other Gram-positive bacteria.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Flagellar and global gene regulation in Helicobacter pylori modulated by changes in DNA supercoiling

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Phosphate flow in the chemotactic response system of Helicobacter pylori

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Genomic analysis of gene expression relationships in transcriptional regulatory networks

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Expression, purification and characterization of the membrane-associated HrcA repressor protein of Helicobacter pylori.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Mechanism of proton gating of a urea channel

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Mechanisms of acid resistance due to the urease system of Helicobacter pylori

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Genetic evidence for histidine kinase HP165 being an acid sensor ofHelicobacter pylori

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

The pH-responsive regulon of HP0244 (FlgS), the cytoplasmic histidine kinase of Helicobacter pylori

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

The role of the Ferric Uptake Regulator (Fur) in regulation of Helicobacter pylori iron uptake.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Growth phase and metal-dependent transcriptional regulation of the fecA genes in Helicobacter pylori.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

In vivo dissection of the Helicobacter pylori Fur regulatory circuit by genome-wide location analysis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Transcriptional profiling of Helicobacter pylori Fur- and iron-regulated gene expression

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Differential regulation of amidase- and formamidase-mediated ammonia production by the Helicobacter pylori fur repressor

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Analysis of growth phase-dependent proteome profiles reveals differential regulation of mRNA and protein in Helicobacter pylori.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Functional organisation of Escherichia coli transcriptional regulatory network

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Identification of small noncoding RNAs in Helicobacter pylori by a bioinformatics-based approach.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Systems biology. Excavating the functional landscape of bacterial cells.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

Transcriptome Complexity in a Genome-Reduced Bacterium

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000938

21 January 2018

pH-responsive DNA-binding activity of Helicobacter pylori NikR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2883586

30 October 2018

Regulation of expression of atypical orphan response regulators of Helicobacter pylori

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel nickel transport mechanism across the bacterial outer membrane energized by the TonB/ExbB/ExbD machinery

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nickel binding and immunological properties of the C-terminal domain of the Helicobacter pylori GroES homologue (HspA)

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The autoregulatory HspR repressor protein governs chaperone gene transcription in Helicobacter pylori

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of the Helicobacter pylori anti-sigma28 factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Negative regulation of bacterial heat shock genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of Helicobacter pylori sigma54 promoter-binding activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Fur repressor controls transcription of iron-activated and -repressed genes in Helicobacter pylori

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NikR-mediated regulation of Helicobacter pylori acid adaptation

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Virulence of coccoid and bacillary forms of Helicobacter pylori in gnotobiotic piglets

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coccoid Helicobacter pylori not culturable in vitro reverts in mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/20548942

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PPAT.1000938

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

0 references

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