(Q33619990)

28 July 2017

1 reference

title

Role for protein-protein interaction databases in human genetics (English)

1 reference

protein-protein interaction

28 July 2017

main subject

1 reference

2

1 reference

28 July 2017

Kristine A Pattin

1

1 reference

28 July 2017

publication date

1 December 2009

1 reference

Expert Review of Proteomics

28 July 2017

published in

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28 July 2017

volume

6

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28 July 2017

issue

6

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28 July 2017

page(s)

647-659

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Evaluation of different domain-based methods in protein interaction prediction

28 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Mammalian two-hybrids come of age.

28 July 2018

1 reference

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From SNPs to pathways: integration of functional effect of sequence variations on models of cell signalling pathways

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Designing genome-wide association studies: sample size, power, imputation, and the choice of genotyping chip

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Association between polymorphisms in RMI1, TOP3A, and BLM and risk of cancer, a case-control study

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Protein-protein interaction databases: keeping up with growing interactomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

From genotypes to genometypes: putting the genome back in genome-wide association studies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Using biological networks to search for interacting loci in genome-wide association studies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Biofilter: a knowledge-integration system for the multi-locus analysis of genome-wide association studies.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

MegaSNPHunter: a learning approach to detect disease predisposition SNPs and high level interactions in genome wide association study

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Interaction networks: from protein functions to drug discovery. A review

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Pathways-based analyses of whole-genome association study data in bipolar disorder reveal genes mediating ion channel activity and synaptic neurotransmission

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Human Protein Reference Database--2009 update

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Reactome knowledgebase of human biological pathways and processes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Evolution of protein-protein interaction network.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Multiple endocrine neoplasms.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A forest-based approach to identifying gene and gene gene interactions.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The first genomewide interaction and locus-heterogeneity linkage scan in bipolar affective disorder: strong evidence of epistatic effects between loci on chromosomes 2q and 6q.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Replicating genotype-phenotype associations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Huntingtin interacting proteins are genetic modifiers of neurodegeneration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

An evaluation of human protein-protein interaction data in the public domain

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Epistatic effects of polymorphisms in genes from the renin-angiotensin, bradykinin, and fibrinolytic systems on plasma t-PA and PAI-1 levels.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Complex adaptive system models and the genetic analysis of plasma HDL-cholesterol concentration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Backward genotype-trait association (BGTA)-based dissection of complex traits in case-control designs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

STRING 7--recent developments in the integration and prediction of protein interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A testing framework for identifying susceptibility genes in the presence of epistasis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A haplotype map of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Towards a proteome-scale map of the human protein–protein interaction network

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A human protein-protein interaction network: a resource for annotating the proteome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Traversing the conceptual divide between biological and statistical epistasis: systems biology and a more modern synthesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Recursive partitioning analysis of complex disease pharmacogenetic studies. I. Motivation and overview

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Genome-wide association studies: theoretical and practical concerns

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The Biomolecular Interaction Network Database and related tools 2005 update

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Computational analysis of gene-gene interactions using multifactor dimensionality reduction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Genetics, statistics and human disease: analytical retooling for complexity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

ADVICE: Automated Detection and Validation of Interaction by Co-Evolution.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Huntingtin-protein interactions and the pathogenesis of Huntington's disease

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The Database of Interacting Proteins: 2004 update

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The Ubiquitous Nature of Epistasis in Determining Susceptibility to Common Human Diseases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The future of genetic association studies in Alzheimer disease

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Power of multifactor dimensionality reduction for detecting gene-gene interactions in the presence of genotyping error, missing data, phenocopy, and genetic heterogeneity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Epistasis: what it means, what it doesn't mean, and statistical methods to detect it in humans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A comprehensive review of genetic association studies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Turning clustering loops: sex determination in Caenorhabditis elegans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

SNPs, protein structure, and disease.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

A combinatorial partitioning method to identify multilocus genotypic partitions that predict quantitative trait variation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Mass spectrometry. From genomics to proteomics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The future of genetic studies of complex human diseases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Ordering gene function: the interpretation of epistasis in regulatory hierarchies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium.

28 July 2018

1 reference

The Challenges of Whole-Genome Approaches to Common Diseases

21 January 2018

1 reference

Mapping SNPs to protein sequence and structure data.

21 January 2018

1 reference

The Correlation between Relatives on the Supposition of Mendelian Inheritance

21 January 2018

1 reference

Global mapping of the yeast genetic interaction network

21 January 2018

1 reference

Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways

21 January 2018

1 reference

Epistasis Between Type 2 Diabetes Susceptibility Loci on Chromosomes 1q21-25 and 10q23-26 in Northern Europeans

21 January 2018

1 reference

Renin–angiotensin system gene polymorphisms and coronary artery disease in a large angiographic cohort: Detection of high order gene–gene interaction

21 January 2018

1 reference

Determinants of the success of whole-genome association testing

21 January 2018

1 reference

Epistasis and its implications for personal genetics.

21 January 2018

1 reference

Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer

21 January 2018

1 reference

Integrated analysis of genetic, genomic and proteomic data

21 January 2018

1 reference

Bayesian inference of epistatic interactions in case-control studies.

21 January 2018

1 reference

Penalized logistic regression for detecting gene interactions.

21 January 2018

1 reference

Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology

21 January 2018

1 reference

Multifactor dimensionality reduction software for detecting gene-gene and gene-environment interactions

21 January 2018

1 reference

Genome-Wide Analysis of Epistasis Using Multifactor Dimensionality Reduction

21 January 2018

1 reference

Genome-wide association studies for common diseases and complex traits

21 January 2018

1 reference

Commonality of functional annotation: a method for prioritization of candidate genes from genome-wide linkage studies

21 January 2018

1 reference

Optimal Use of Expert Knowledge in Ant Colony Optimization for the Analysis of Epistasis in Human Disease

21 January 2018

1 reference

Protein interaction networks

21 January 2018

1 reference

Systematic genetic analysis with ordered arrays of yeast deletion mutants

21 January 2018

1 reference

Computational Prediction of Protein–Protein Interactions

21 January 2018

1 reference

PIE: an online prediction system for protein-protein interactions from text

21 January 2018

1 reference

The commonality of protein interaction networks determined in neurodegenerative disorders (NDDs).

21 January 2018

1 reference

STRING 8--a global view on proteins and their functional interactions in 630 organisms

21 January 2018

1 reference

UniHI 4: new tools for query, analysis and visualization of the human protein-protein interactome

21 January 2018

1 reference

Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes

21 January 2018

1 reference

Evidence for epistasis between SLC6A4 and ITGB3 in autism etiology and in the determination of platelet serotonin levels.

21 January 2018

1 reference

Systematic biological prioritization after a genome-wide association study: an application to nicotine dependence

21 January 2018

1 reference

Agnosticism and equity in genome-wide association studies

21 January 2018

1 reference

The BioGRID Interaction Database: 2008 update

21 January 2018

1 reference

MINT: the Molecular INTeraction database

21 January 2018

1 reference

Recent molecular biological progress in Marfan syndrome and Marfan-associated disorders

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Genome-wide association studies: progress in identifying genetic biomarkers in common, complex diseases.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

The Pathway Less Traveled: Moving from Candidate Genes to Candidate Pathways in the Analysis of Genome-Wide Data from Large Scale Pharmacogenetic Association Studies

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Pathway analysis by adaptive combination of P-values

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Ideal discrimination of discrete clinical endpoints using multilocus genotypes.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813729

Genes, Environment, and Cardiovascular Disease

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19929610

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifying interacting SNPs using Monte Carlo logic regression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19929610

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1586/EPR.09.86

1 reference

release_f3g53tb3dfg7jfrrnolhzfr464

28 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/f3g53tb3dfg7jfrrnolhzfr464

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

2813729

1 reference

28 July 2017

1 reference