(Q33627578)

28 July 2017

title

Altered intra-nuclear organisation of heterochromatin and genes in ICF syndrome (English)

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28 July 2017

2

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28 July 2017

Emanuela V Volpi

8

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author name string

Andrew Jefferson

1

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28 July 2017

Daniela Moralli

3

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28 July 2017

Natalie Wilson

4

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28 July 2017

Mohammed Yusuf

5

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28 July 2017

Giorgio Gimelli

6

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28 July 2017

Jiannis Ragoussis

7

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28 July 2017

language of work or name

English

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publication date

29 June 2010

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28 July 2017

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28 July 2017

volume

5

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28 July 2017

issue

6

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28 July 2017

page(s)

e11364

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Creative Commons Attribution 4.0 International

28 July 2017

copyright license

start time

29 June 2010

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April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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DNA methyltransferase 3B (DNMT3B) mutations in ICF syndrome lead to altered epigenetic modifications and aberrant expression of genes regulating development, neurogenesis and immune function.

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Preservation of large-scale chromatin structure in FISH experiments.

21 June 2018

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Folding and organization of a contiguous chromosome region according to the gene distribution pattern in primary genomic sequence

21 June 2018

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PML nuclear bodies are highly organised DNA-protein structures with a function in heterochromatin remodelling at the G2 phase.

21 June 2018

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Neural induction promotes large-scale chromatin reorganisation of the Mash1 locus.

21 June 2018

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The nuclear oncoprotein TLX1/HOX11 associates with pericentromeric satellite 2 DNA in leukemic T-cells

21 June 2018

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Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry

21 June 2018

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Differences in nuclear positioning of 1q12 pericentric heterochromatin in normal and tumor B lymphocytes with 1q rearrangements.

21 June 2018

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DNMT3B mutations and DNA methylation defect define two types of ICF syndrome.

21 June 2018

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Locus 'decontraction' and centromeric recruitment contribute to allelic exclusion of the immunoglobulin heavy-chain gene

21 June 2018

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The ICF syndrome, a DNA methyltransferase 3B deficiency and immunodeficiency disease

21 June 2018

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21 June 2018

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Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development

21 June 2018

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Evolutionary conservation of chromosome territory arrangements in cell nuclei from higher primates.

21 June 2018

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Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

DNA methyltransferase 3B mutations linked to the ICF syndrome cause dysregulation of lymphogenesis genes

21 June 2018

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Nuclear relocation of a transactivator subunit precedes target gene activation.

21 June 2018

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A new mathematical model for relative quantification in real-time RT-PCR

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Genetic variation in ICF syndrome: evidence for genetic heterogeneity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

DNA hypomethylation and unusual chromosome instability in cell lines from ICF syndrome patients

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Nuclear localization and histone acetylation: a pathway for chromatin opening and transcriptional activation of the human beta-globin locus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Whole-genome methylation scan in ICF syndrome: hypomethylation of non-satellite DNA repeats D4Z4 and NBL2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Nuclear organization of mammalian genomes. Polar chromosome territories build up functionally distinct higher order compartments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Differences in the localization and morphology of chromosomes in the human nucleus.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Nuclear compartments and gene regulation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Dynamic repositioning of genes in the nucleus of lymphocytes preparing for cell division

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

The human polycomb group complex associates with pericentromeric heterochromatin to form a novel nuclear domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Localization of the ICF syndrome to chromosome 20 by homozygosity mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Spatial organization of large-scale chromatin domains in the nucleus: a magnified view of single chromosome territories.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

DNA demethylation and pericentromeric rearrangements of chromosome 1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Preferential induction of chromosome 1 multibranched figures and whole-arm deletions in a human pro-B cell line treated with 5-azacytidine or 5-azadeoxycytidine

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

DNA, FISH and complementation studies in ICF syndrome: DNA hypomethylation of repetitive and single copy loci and evidence for a trans acting factor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Specific induction of uncoiling and recombination by azacytidine in classical satellite-containing constitutive heterochromatin.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Chromosome instability in ICF syndrome: formation of micronuclei from multibranched chromosomes 1 demonstrated by fluorescence in situ hybridization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

FISH analysis on spontaneously arising micronuclei in the ICF syndrome.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Immunodeficiency, centromeric heterochromatin instability of chromosomes 1, 9, and 16, and facial anomalies: the ICF syndrome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Dynamic organization of DNA replication in mammalian cell nuclei: spatially and temporally defined replication of chromosome-specific alpha-satellite DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

A FISH study of chromosome fusion in the ICF syndrome: involvement of paracentric heterochromatin but not of the centromeres themselves

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Satellite 2 methylation patterns in normal and ICF syndrome cells and association of hypomethylation with advanced replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Escape from gene silencing in ICF syndrome: evidence for advanced replication time as a major determinant.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

ICF syndrome in a girl with DNA hypomethylation but without detectable DNMT3B mutation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Defective B-cell-negative selection and terminal differentiation in the ICF syndrome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Subcellular distribution of HP1 proteins is altered in ICF syndrome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Differential large-scale chromatin compaction and intranuclear positioning of transcribed versus non-transcribed transgene arrays containing beta-globin regulatory sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Nuclear repositioning marks the selective exclusion of lineage-inappropriate transcription factor loci during T helper cell differentiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Early transcription and silencing of cytokine genes underlie polarization of T helper cell subsets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

A functional enhancer suppresses silencing of a transgene and prevents its localization close to centrometric heterochromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

Topology of genes and nontranscribed sequences in human interphase nuclei

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011364

A novel case of immunodeficiency, centromeric instability, and facial anomalies (the ICF syndrome): immunologic and cytogenetic studies

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2894064

Interphase chromosomal abnormalities and mitotic missegregation of hypomethylated sequences in ICF syndrome cells

30 October 2018

1 reference

12 December 2020

Roles for Dnmt3b in mammalian development: a mouse model for the ICF syndrome

1 reference

12 December 2020

Defective de novo methylation of viral and cellular DNA sequences in ICF syndrome cells

1 reference

12 December 2020

Nuclear structure and gene activity in human differentiated cells

1 reference

12 December 2020

Multibranched chromosomes 1, 9, and 16 in a patient with combined IgA and IgE deficiency

1 reference

12 December 2020

Interphase cytogenetics of the ICF syndrome

1 reference

12 December 2020

An embryonic-like methylation pattern of classical satellite DNA is observed in ICF syndrome

1 reference

12 December 2020

Abnormal methylation pattern in constitutive and facultative (X inactive chromosome) heterochromatin of ICF patients

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0011364

Identifiers

DOI

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28 July 2017

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28 July 2017

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