(Q33634094)

28 July 2017

title

Transcription Factors in Fungi: TFome Dynamics, Three Major Families, and Dual-Specificity TFs (English)

1 reference

28 July 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28523015%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

author name string

Ekaterina Shelest

series ordinal

1

1 reference

28 July 2017

publication date

4 May 2017

1 reference

28 July 2017

published in

Frontiers in Genetics

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28523015%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

volume

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28523015%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

page(s)

53

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28523015%20AND%20SRC:MED&resulttype=core&format=json

A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data

10 June 2020

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Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

21 June 2018

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Transcription factors in microalgae: genome-wide prediction and comparative analysis

21 June 2018

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Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina)

21 June 2018

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Prevalence of transcription factors in ascomycete and basidiomycete fungi

21 June 2018

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MycoCosm portal: gearing up for 1000 fungal genomes.

21 June 2018

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Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages

21 June 2018

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PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome

21 June 2018

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Transcription factor Amr1 induces melanin biosynthesis and suppresses virulence in Alternaria brassicicola

21 June 2018

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MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score.

21 June 2018

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Genomic repertoires of DNA-binding transcription factors across the tree of life

21 June 2018

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Lineage-specific expansion of DNA-binding transcription factor families

21 June 2018

1 reference

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

21 June 2018

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Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication

21 June 2018

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Transcription factors in fungi.

21 June 2018

1 reference

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DBD--taxonomically broad transcription factor predictions: new content and functionality

21 June 2018

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Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes

21 June 2018

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The many faces of the helix-turn-helix domain: transcription regulation and beyond

21 June 2018

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Indole-diterpene gene cluster from Aspergillus flavus

21 June 2018

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Structure and evolution of transcriptional regulatory networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5415576

Sequence-specific DNA binding determined by contacts outside the helix-turn-helix motif of the ParB homolog KorB.

21 June 2018

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 June 2018

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Scaling laws in the functional content of genomes

21 June 2018

1 reference

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DNA-binding proteins and evolution of transcription regulation in the archaea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5415576

Isoforms of hepatocyte nuclear factor-6 differ in DNA-binding properties, contain a bifunctional homeodomain, and define the new ONECUT class of homeodomain proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5415576

The regulator of nitrate assimilation in ascomycetes is a dimer which binds a nonrepeated, asymmetrical sequence.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5415576

A novel DNA binding motif for yeast zinc cluster proteins: the Leu3p and Pdr3p transcriptional activators recognize everted repeats

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5415576

Determinants of binding-site specificity among yeast C6 zinc cluster proteins

21 June 2018

1 reference

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The yeast activator HAP1--a GAL4 family member--binds DNA in a directly repeated orientation

21 June 2018

1 reference

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Structure of homeobox-leucine zipper genes suggests a model for the evolution of gene families

21 June 2018

1 reference

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DNA recognition by GAL4: structure of a protein-DNA complex.

21 June 2018

1 reference

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PrnA, a Zn2Cys6 activator with a unique DNA recognition mode, requires inducer for in vivo binding

21 June 2018

1 reference

https://api.crossref.org/works/10.3389%2FFGENE.2017.00053

Characterization of the BMR1 gene encoding a transcription factor for melanin biosynthesis genes in the phytopathogenic fungus Bipolaris oryzae.

21 January 2018

1 reference

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Fungal biology in the post-genomic era.

21 January 2018

1 reference

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Novel fungal transcriptional activators, Cmr1p of Colletotrichum lagenarium and pig1p of Magnaporthe grisea, contain Cys2His2 zinc finger and Zn(II)2Cys6 binuclear cluster DNA-binding motifs and regulate transcription of melanin biosynthesis genes i

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFGENE.2017.00053

A catalogue of eukaryotic transcription factor types, their evolutionary origin, and species distribution

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28523015

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FGENE.2017.00053

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28523015%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28523015%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference