(Q28654542)

English

Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina)

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scholarly article

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Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina) (English)

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Lichtheimia corymbifera

object named as

Lichtheimia corymbifera

1 reference

based on heuristic

inferred from title

16

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Sebastian Böcker

17

object named as

Sebastian Böcker

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object named as

Sascha Winter

2

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Stefanie Wehner

object named as

Stefanie Wehner

6

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object named as

Vito Valiante

8

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Ekaterina Shelest

object named as

Ekaterina Shelest

3

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Marina Marcet-Houben

object named as

Marina Marcet-Houben

4

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Minou Nowrousian

object named as

Minou Nowrousian

11

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Michael Sammeth

object named as

Michael Sammeth

9

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Ilse D. Jacobsen

object named as

Ilse D Jacobsen

13

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14

object named as

Manja Marz

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7

object named as

Jörg Linde

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Axel A Brakhage

15

object named as

Axel A Brakhage

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5

object named as

Fabian Horn

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author name string

Volker U Schwartze

1

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Konstantin Riege

10

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Kerstin Kaerger

12

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Kerstin Voigt

18

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language of work or name

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publication date

August 2014

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10

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8

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e1004496

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copyright license

Creative Commons Attribution 4.0 International

14 August 2014

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April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

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EdgeR

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Mira

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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MUMmer

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

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Alternative splicing and subfunctionalization generates functional diversity in fungal proteomes

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Species recognition and clinical relevance of the zygomycetous genus Lichtheimia (syn. Absidia pro parte, Mycocladus)

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3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Epidemiology and outcome of zygomycosis: a review of 929 reported cases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Cloning and functional characterization of the Rhizopus oryzae high affinity iron permease (rFTR1) gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Fungi, aflatoxins, and cyclopiazonic acid associated with peanut retailing in Botswana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Role of MADS box proteins and their cofactors in combinatorial control of gene expression and cell development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Repetitive DNA elements in fungi (Mycota): impact on genomic architecture and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

The WRKY superfamily of plant transcription factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Acquisition, transport, and storage of iron by pathogenic fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Mucormycosis during deferoxamine therapy is a siderophore-mediated infection. In vitro and in vivo animal studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Processing of tRNA in Prokaryotes and Eukaryote

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Control of dimorphism in Mucor rouxii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

A case of pseudoparacoccidioidomycosis: detection of the yeast phase of Mucor circinelloides in a clinical specimen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Pattern searching/alignment with RNA primary and secondary structures: an effective descriptor for tRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Rhizoferrin: a complexone type siderophore of the Mucorales and entomophthorales (Zygomycetes)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

3 June 2018

Revision of the genus Absidia (Mucorales, Zygomycetes) based on physiological, phylogenetic, and morphological characters; thermotolerant Absidia spp. form a coherent group, Mycocladiaceae fam. nov.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Pulmonary zygomycosis in solid organ transplant recipients in the current era.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

A surprisingly large RNase P RNA in Candida glabrata

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Computation of median gene clusters.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Efficient computation of approximate gene clusters based on reference occurrences.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Evolution of host resistance in a toxin-producing bacterial-fungal alliance

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Molecular cloning of an extracellular aspartic proteinase from Rhizopus microsporus and evidence for its expression during infection

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

EPoS: a modular software framework for phylogenetic analysis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Btrim: a fast, lightweight adapter and quality trimming program for next-generation sequencing technologies.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Gecko and GhostFam: rigorous and efficient gene cluster detection in prokaryotic genomes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Zygomycosis in Europe: analysis of 230 cases accrued by the registry of the European Confederation of Medical Mycology (ECMM) Working Group on Zygomycosis between 2005 and 2007

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004496

21 January 2018

Siderophore production by pathogenic mucorales and uptake of deferoxamine B.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4133162

27 November 2018

Fungal ferritins: the ferritin from mycelia of Absidia spinosa is a bacterioferritin

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Strain-dependent variation in ribosomal DNA arrangement in Absidia glauca

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The rising trend of invasive zygomycosis in patients with uncontrolled diabetes mellitus

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A high-affinity iron permease essential for Candida albicans virulence

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of an extracellular subtilisin protease of Rhizopus microsporus and evidence for its expression during invasive rhinoorbital mycosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microorganisms surviving for 5300 years

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heads or tails: a simple reliability check for multiple sequence alignments

1 reference

https://pubmed.ncbi.nlm.nih.gov/25121733

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Using high-technology to enforce low-technology safety measures: the use of third-party remote video auditing and real-time feedback in healthcare

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PGEN.1004496

Association mapping of autumn-seeded rye (Secale cereale L.) reveals genetic linkages between genes controlling winter hardiness and plant development

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PGEN.1004496

Identifiers

10.1371/JOURNAL.PGEN.1004496

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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