(Q33635964)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

title

In vivo cleavage specificity of Trypanosoma brucei editosome endonucleases (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

Jason Carnes

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

Brian Oliver

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

5

D Noah Sather

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

author name string

Atashi Anupama

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

Kenneth Stuart

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

language of work or name

English

0 references

publication date

1 May 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

volume

45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

page(s)

4667-4686

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

13 March 2020

copyright license

start time

21 February 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The Architecture of Trypanosoma brucei editosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

High-throughput sequencing of partially edited trypanosome mRNAs reveals barriers to editing progression and evidence for alternative editing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

U-Insertion/Deletion mRNA-Editing Holoenzyme: Definition in Sight

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Trypanosome RNA editing: the complexity of getting U in and taking U out

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Differential Editosome Protein Function between Life Cycle Stages of Trypanosoma brucei

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Single point mutations in ATP synthase compensate for mitochondrial genome loss in trypanosomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Identification of essential and non-essential protein kinases by a fusion PCR method for efficient production of transgenic Trypanosoma brucei

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

KREX2 is not essential for either procyclic or bloodstream form Trypanosoma brucei.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

KREPB6, KREPB7, and KREPB8 are important for editing endonuclease function in Trypanosoma brucei.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Complete characterization of the edited transcriptome of the mitochondrion of Physarum polycephalum using deep sequencing of RNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Endonuclease associations with three distinct editosomes in Trypanosoma brucei

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

TbRGG2 facilitates kinetoplastid RNA editing initiation and progression past intrinsic pause sites

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

CRE recombinase-based positive-negative selection systems for genetic manipulation in Trypanosoma brucei

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

RNA editing in Trypanosoma brucei requires three different editosomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Reconstitution of full-round uridine-deletion RNA editing with three recombinant proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Compositionally and functionally distinct editosomes in Trypanosoma brucei

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

An essential RNase III insertion editing endonuclease in Trypanosoma brucei.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Complex management: RNA editing in trypanosomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Natural and induced dyskinetoplastic trypanosomatids: how to live without mitochondrial DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Resolution of the RNA editing gRNA-directed endonuclease from two other endonucleases of Trypanosoma brucei mitochondria.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

The MURF3 gene of T. brucei contains multiple domains of extensive editing and is homologous to a subunit of NADH dehydrogenase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

An extensively edited mitochondrial transcript in kinetoplastids encodes a protein homologous to ATPase subunit 6.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

A deletion site editing endonuclease in Trypanosoma brucei.

28 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Reconstitution of uridine-deletion precleaved RNA editing with two recombinant enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Identification of candidate mitochondrial RNA editing ligases from Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

An RNA ligase essential for RNA editing and survival of the bloodstream form of Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Ribonuclease revisited: structural insights into ribonuclease III family enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Ribonuclease III mechanisms of double-stranded RNA cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Trypanosoma brucei RNA editing: coupled cycles of U deletion reveal processive activity of the editing complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Trypanosoma brucei: a first-generation CRE-loxP site-specific recombination system

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Developmental aspects of uridine addition within mitochondrial transcripts of Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKX116

Gene Loss and Error-Prone RNA Editing in the Mitochondrion of Perkinsela, an Endosymbiotic Kinetoplastid.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

Identification and characterization of trypanosome RNA-editing complex components

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5416837

RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28334821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Cycles of progressive realignment of gRNA with mRNA in RNA editing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28334821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Developmentally regulated addition of nucleotides within apocytochrome b transcripts in Trypanosoma brucei

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28334821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKX116

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28334821%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

1 reference