(Q33686414)

28 July 2017

title

Global regulation of gene expression in response to cysteine availability in Clostridium perfringens (English)

1 reference

28 July 2017

main subject

Clostridium perfringens

object named as

Clostridium perfringens

1 reference

bacterial gene expression regulation

inferred from title

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

8 July 2024

3

Marc Monot

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

Isabelle Martin-Verstraete

8 July 2024

7

object named as

Isabelle Martin-Verstraete

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

8 July 2024

author name string

Gaelle André

1

1 reference

28 July 2017

Elise Haudecoeur

2

1 reference

28 July 2017

Kaori Ohtani

4

1 reference

28 July 2017

Tohru Shimizu

5

1 reference

28 July 2017

Bruno Dupuy

6

1 reference

28 July 2017

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=20822510

8 July 2024

publication date

7 September 2010

1 reference

full work available at URL

28 July 2017

https://bmcmicrobiol.biomedcentral.com/counter/pdf/10.1186/1471-2180-10-234

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

http://www.biomedcentral.com/content/pdf/1471-2180-10-234.pdf

8 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

http://www.biomedcentral.com/1471-2180/10/234

8 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

http://www.biomedcentral.com/1471-2180/10/234/abstract

8 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20822510/pdf/?tool=EBI

8 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20822510/?tool=EBI

8 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

https://europepmc.org/articles/PMC2940859

8 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

https://europepmc.org/articles/PMC2940859?pdf=render

8 July 2024

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20822510

https://link.springer.com/content/pdf/10.1186/1471-2180-10-234.pdf

8 July 2024

1 reference

Crossref

DOI

10.1186/1471-2180-10-234

https://api.crossref.org/works/10.1186/1471-2180-10-234

8 July 2024

1 reference

28 July 2017

volume

10

1 reference

28 July 2017

page(s)

234

1 reference

describes a project that uses

28 July 2017

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/2940859

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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21 June 2018

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21 June 2018

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21 June 2018

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The CymR regulator in complex with the enzyme CysK controls cysteine metabolism in Bacillus subtilis

21 June 2018

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S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum

21 June 2018

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Characterization of genes regulated directly by the VirR/VirS system in Clostridium perfringens

21 June 2018

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An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters

21 June 2018

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Comparative genomic analysis of T-box regulatory systems in bacteria

21 June 2018

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21 June 2018

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Desulfoferrodoxin of Clostridium acetobutylicum functions as a superoxide reductase

21 June 2018

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Control of methionine synthesis and uptake by MetR and homocysteine in Streptococcus mutans.

21 June 2018

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The system biology of thiol redox system in Escherichia coli and yeast: differential functions in oxidative stress, iron metabolism and DNA synthesis

21 June 2018

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Conversion of methionine to cysteine in Bacillus subtilis and its regulation

21 June 2018

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The many faces of glutathione in bacteria

21 June 2018

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IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli.

21 June 2018

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Global control of cysteine metabolism by CymR in Bacillus subtilis

21 June 2018

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Nutritional Factors Affecting the Ratio of Solvents Produced by Clostridium acetobutylicum

21 June 2018

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Regulation of the Bacillus subtilis ytmI operon, involved in sulfur metabolism

21 June 2018

1 reference

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Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.

21 June 2018

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21 June 2018

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Three different systems participate in L-cystine uptake in Bacillus subtilis

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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High levels of intracellular cysteine promote oxidative DNA damage by driving the fenton reaction

21 June 2018

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21 June 2018

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Identification of Bacillus subtilis CysL, a regulator of the cysJI operon, which encodes sulfite reductase

21 June 2018

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Proteome and transcriptome analysis of the virulence genes regulated by the VirR/VirS system in Clostridium perfringens

21 June 2018

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Clostridial VirR/VirS regulon involves a regulatory RNA molecule for expression of toxins

21 June 2018

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

21 June 2018

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21 June 2018

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IscR, an Fe-S cluster-containing transcription factor, represses expression of Escherichia coli genes encoding Fe-S cluster assembly proteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Clostridial iron-sulphur proteins.

21 June 2018

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The molecular evolution of pyridoxal-5'-phosphate-dependent enzymes.

21 June 2018

1 reference

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Identification of novel VirR/VirS-regulated genes in Clostridium perfringens.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

The VirR response regulator from Clostridium perfringens binds independently to two imperfect direct repeats located upstream of the pfoA promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Total homocysteine and cardiovascular disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Virulence genes of Clostridium perfringens.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

The virR/virS locus regulates the transcription of genes encoding extracellular toxin production in Clostridium perfringens

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Distribution of thiols in microorganisms: mycothiol is a major thiol in most actinomycetes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Adaptive eradication of methionine and cysteine from cyanobacterial light-harvesting proteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Minimal Growth Requirements for Clostridium perfringens and Isolation of Auxotrophic Mutants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

CymR, the master regulator of cysteine metabolism in Staphylococcus aureus, controls host sulphur source utilization and plays a role in biofilm formation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Novel substrate specificity of glutathione synthesis enzymes from Streptococcus agalactiae and Clostridium acetobutylicum.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Oxidative stress response in Clostridium perfringens

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Identification of a novel locus that regulates expression of toxin genes in Clostridium perfringens

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

The luxS gene is involved in cell-cell signalling for toxin production in Clostridium perfringens.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Molecular evolution of protein atomic composition.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Functional analysis of the Bacillus subtilis cysK and cysJI genes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Comparison of different methods of cell lysis and protein measurements in Clostridium perfringens: application to the cell volume determination.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2940859

Thioredoxins in bacteria: functions in oxidative stress response and regulation of thioredoxin genes

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20822510

12 December 2020

inferred from PubMed ID database lookup

Purification and characterization of an inducible dissimilatory type sulfite reductase from Clostridium pasteurianum

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20822510

12 December 2020

inferred from PubMed ID database lookup

Genetic analysis of the ycgJ-metB-cysK-ygaG operon negatively regulated by the VirR/VirS system in Clostridium perfringens

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20822510

12 December 2020

inferred from PubMed ID database lookup

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

36

1 reference

Crossref

DOI

10.1186/1471-2180-10-234

https://api.crossref.org/works/10.1186/1471-2180-10-234

8 July 2024

Identifiers

DOI

10.1186/1471-2180-10-234

1 reference

Dimensions Publication ID

28 July 2017

0 references

1 reference

28 July 2017

1 reference