(Q33696035)

28 July 2017

title

Effect of membrane thickness on conformational sampling of phospholamban from computer simulations (English)

1 reference

28 July 2017

1 reference

Maryam Sayadi

1

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28 July 2017

Seiichiro Tanizaki

series ordinal

2

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28 July 2017

Michael Feig

series ordinal

3

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28 July 2017

language of work or name

English

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publication date

1 March 2010

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28 July 2017

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28 July 2017

volume

98

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28 July 2017

issue

5

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28 July 2017

page(s)

805-814

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

28 July 2017

cites work

1 reference

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Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach

14 July 2018

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Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase

14 July 2018

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Partitioning of amino acid side chains into lipid bilayers: results from computer simulations and comparison to experiment

14 July 2018

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The role of phosphorylation on the structure and dynamics of phospholamban: a model from molecular simulations

14 July 2018

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Structural changes in the cytoplasmic domain of phospholamban by phosphorylation at Ser16: a molecular dynamics study.

14 July 2018

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Determination of membrane protein structure and dynamics by magic-angle-spinning solid-state NMR spectroscopy.

14 July 2018

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Mapping the interaction surface of a membrane protein: unveiling the conformational switch of phospholamban in calcium pump regulation.

14 July 2018

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The alpha-helical propensity of the cytoplasmic domain of phospholamban: a molecular dynamics simulation of the effect of phosphorylation and mutation.

14 July 2018

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Structure and dynamics of phospholamban in solution and in membrane bilayer: computer simulations

14 July 2018

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Phospholamban structural dynamics in lipid bilayers probed by a spin label rigidly coupled to the peptide backbone

14 July 2018

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(1)H/(15)N heteronuclear NMR spectroscopy shows four dynamic domains for phospholamban reconstituted in dodecylphosphocholine micelles.

14 July 2018

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NMR solution structure and topological orientation of monomeric phospholamban in dodecylphosphocholine micelles

14 July 2018

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Spatial and dynamic interactions between phospholamban and the canine cardiac Ca2+ pump revealed with use of heterobifunctional cross-linking agents

14 July 2018

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Dilated cardiomyopathy and heart failure caused by a mutation in phospholamban

14 July 2018

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Implicit solvent model studies of the interactions of the influenza hemagglutinin fusion peptide with lipid bilayers

14 July 2018

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Direct spectroscopic detection of molecular dynamics and interactions of the calcium pump and phospholamban.

14 July 2018

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A fluorescence energy transfer method for analyzing protein oligomeric structure: application to phospholamban

14 July 2018

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14 July 2018

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14 July 2018

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Phospholamban: protein structure, mechanism of action, and role in cardiac function

14 July 2018

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Membrane asymmetry in isolated canine cardiac sarcoplasmic reticulum: comparison with skeletal muscle sarcoplasmic reticulum.

14 July 2018

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Functional Co-expression of the canine cardiac Ca2+ pump and phospholamban in Spodoptera frugiperda (Sf21) cells reveals new insights on ATPase regulation

14 July 2018

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Phospholamban inhibitory function is activated by depolymerization

14 July 2018

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Membrane structure: lipid-protein interactions in microsomal membranes

14 July 2018

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Influences of solvent water on protein folding: free energies of solvation of cis and trans peptides are nearly identical

14 July 2018

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14 July 2018

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Structural dynamics and topology of phospholamban in oriented lipid bilayers using multidimensional solid-state NMR

14 July 2018

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A generalized Born formalism for heterogeneous dielectric environments: application to the implicit modeling of biological membranes

30 October 2018

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Role of leucine 31 of phospholamban in structural and functional interactions with the Ca2+ pump of cardiac sarcoplasmic reticulum

30 October 2018

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30 October 2018

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Improved treatment of the protein backbone in empirical force fields.

30 October 2018

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Phospholamban binds in a compact and ordered conformation to the Ca-ATPase

30 October 2018

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Theoretical Analysis of Residual Dipolar Coupling Patterns in Regular Secondary Structures of Proteins

30 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2830431

Implicit solvent model estimates of the stability of model structures of the alamethicin channel

30 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2830431

Phosphorylation by cAMP-dependent protein kinase modulates the structural coupling between the transmembrane and cytosolic domains of phospholamban

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2830431

New analytic approximation to the standard molecular volume definition and its application to generalized Born calculations.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2830431

Ez, a Depth-dependent Potential for Assessing the Energies of Insertion of Amino Acid Side-chains into Membranes: Derivation and Applications to Determining the Orientation of Transmembrane and Interfacial Helices

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2830431

Solid-state NMR and rigid body molecular dynamics to determine domain orientations of monomeric phospholamban

30 October 2018

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12 December 2020

Balancing an accurate representation of the molecular surface in generalized born formalisms with integrator stability in molecular dynamics simulations

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12 December 2020

Membrane-bound structure and energetics of alpha-synuclein

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12 December 2020

Molecular dynamics studies on structure and dynamics of phospholamban monomer and pentamer in membranes

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12 December 2020

Nature and site of phospholamban regulation of the Ca2+ pump of sarcoplasmic reticulum

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12 December 2020

Folding Peptides into Lipid Bilayer Membranes

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12 December 2020

Kinetics from Implicit Solvent Simulations of Biomolecules as a Function of Viscosity

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12 December 2020

Activation by adenosine triphosphate in the phosphorylation kinetics of sodium and potassium ion transport adenosine triphosphatase

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12 December 2020

Effect of long chain unsaturated fatty acids on the calcium transport of sarcoplasmic reticulum

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12 December 2020

Studies on phosphorylation of canine cardiac sarcoplasmic reticulum by calmodulin-dependent protein kinase

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12 December 2020

A leucine zipper stabilizes the pentameric membrane domain of phospholamban and forms a coiled-coil pore structure

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12 December 2020

10.1016/J.BPJ.2009.11.015

Identifiers

DOI

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28 July 2017

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28 July 2017

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