(Q33700195)

English

A global comparison between nuclear and cytosolic transcriptomes reveals differential compartmentalization of alternative transcript isoforms

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

A global comparison between nuclear and cytosolic transcriptomes reveals differential compartmentalization of alternative transcript isoforms (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

author name string

Liang Chen

1

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

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publication date

6 December 2009

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

38

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

1086-1097

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

A physical and functional link between splicing factors promotes pre-mRNA 3' end processing

1 reference

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21 June 2018

A hierarchical Bayesian model for comparing transcriptomes at the individual transcript isoform level

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Execution of nonsense-mediated mRNA decay: what defines a substrate?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

1 reference

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21 June 2018

Alternative isoform regulation in human tissue transcriptomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Identify alternative splicing events based on position-specific evolutionary conservation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Promoter-proximal introns in Arabidopsis thaliana are enriched in dispersed signals that elevate gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Splicing promotes rapid and efficient mRNA export in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Functional coupling of last-intron splicing and 3'-end processing to transcription in vitro: the poly(A) signal couples to splicing before committing to cleavage

1 reference

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21 June 2018

A mammalian microRNA expression atlas based on small RNA library sequencing

1 reference

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21 June 2018

RNA maps reveal new RNA classes and a possible function for pervasive transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Introns regulate the rate of unstable mRNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Splicing and the evolution of proteins in mammals

1 reference

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Repression of protein synthesis by miRNAs: how many mechanisms?

1 reference

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21 June 2018

Identification and classification of conserved RNA secondary structures in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Control of translation and mRNA degradation by miRNAs and siRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

MicroRNAs direct rapid deadenylation of mRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

ASD: a bioinformatics resource on alternative splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

From birth to death: the complex lives of eukaryotic mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Intron size and exon evolution in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

mRNA localisation gets more complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Nonsense-mediated mRNA decay: terminating erroneous gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Splicing enhances translation in mammalian cells: an additional function of the exon junction complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

The power of the 3' UTR: translational control and development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Analysis of the stimulatory effect of splicing on mRNA production and utilization in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

A quantitative analysis of intron effects on mammalian gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Promoter proximal splice sites enhance transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

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U1 snRNA associates with TFIIH and regulates transcriptional initiation

1 reference

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Integrating mRNA processing with transcription

1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

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Magoh, a human homolog of Drosophila mago nashi protein, is a component of the splicing-dependent exon-exon junction complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

mRNA localization: message on the move

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

21 June 2018

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

1 reference

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1 reference

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Splicing is required for rapid and efficient mRNA export in metazoans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

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A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831334

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1 reference

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1 reference

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12 December 2020

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10.1093/NAR/GKP1136

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

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