(Q33702131)

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Characterization of residual structure in the thermally denatured state of barnase by simulation and experiment: Description of the folding pathway

scientific article published on December 9, 1997

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Europe PubMed Central

PubMed publication ID

28 July 2017

Characterization of residual structure in the thermally denatured state of barnase by simulation and experiment: description of the folding pathway (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Characterization of residual structure in the thermally denatured state of barnase by simulation and experiment: Description of the folding pathway (English)

1 reference

10.1073/PNAS.94.25.13409

https://api.crossref.org/works/10.1073/PNAS.94.25.13409

27 November 2024

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K. B. Wong

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

author name string

C. J. Bond

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

J. Clarke

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

A. R. Fersht

4

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

V. Daggett

5

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27 November 2024

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publication date

1 December 1997

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28 July 2017

9 December 1997

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National Center for Biotechnology Information

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=9391038

27 November 2024

full work available at URL

http://www.pnas.org/content/94/25/13409.full.pdf

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

https://europepmc.org/articles/PMC28318

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Europe PubMed Central

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

https://europepmc.org/articles/PMC28318?pdf=render

online access status

content deliverer

Europe PubMed Central

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9391038

27 November 2024

https://pnas.org/doi/pdf/10.1073/pnas.94.25.13409

1 reference

10.1073/PNAS.94.25.13409

https://api.crossref.org/works/10.1073/PNAS.94.25.13409

27 November 2024

Proceedings of the National Academy of Sciences of the United States of America

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Europe PubMed Central

PubMed publication ID

28 July 2017

94

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Europe PubMed Central

PubMed publication ID

28 July 2017

25

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Europe PubMed Central

PubMed publication ID

28 July 2017

13409-13413

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Structural and dynamical properties of a denatured protein. Heteronuclear 3D NMR experiments and theoretical simulations of lysozyme in 8 M urea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

NMR studies of unfolded states of an SH3 domain in aqueous solution and denaturing conditions

1 reference

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21 June 2018

Nucleation mechanisms in protein folding

1 reference

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21 June 2018

A dynamic bundle of four adjacent hydrophobic segments in the denatured state of staphylococcal nuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Initiation sites of protein folding by NMR analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Structural analysis of non-native states of proteins by NMR methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Structural and dynamic characterization of the urea denatured state of the immunoglobulin binding domain of streptococcal protein G by multidimensional heteronuclear NMR spectroscopy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

The sixth Datta Lecture. Protein folding and stability: the pathway of folding of barnase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Toward solving the folding pathway of barnase: the complete backbone 13C, 15N, and 1H NMR assignments of its pH-denatured state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Characterizing transition states in protein folding: an essential step in the puzzle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Structural characterization of folded and unfolded states of an SH3 domain in equilibrium in aqueous buffer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

pKA values of carboxyl groups in the native and denatured states of barnase: the pKA values of the denatured state are on average 0.4 units lower than those of model compounds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

A comparison of the pH, urea, and temperature-denatured states of barnase by heteronuclear NMR: implications for the initiation of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Dimensions of protein random coils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Mapping the transition state and pathway of protein folding by protein engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

An analysis of protein folding pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Determination of the three-dimensional solution structure of barnase using nuclear magnetic resonance spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

A molecular dynamics simulation of polyalanine: an analysis of equilibrium motions and helix-coil transitions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

The folding of an enzyme. IV. Structure of an intermediate in the refolding of barnase analysed by a protein engineering procedure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

The folding of an enzyme. III. Structure of the transition state for unfolding of barnase analysed by a protein engineering procedure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28318

21 June 2018

Structure of the transition state for folding of a protein derived from experiment and simulation

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

NMR determination of residual structure in a urea-denatured protein, the 434-repressor

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Water storage in the mantle

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Backbone dynamics of a highly disordered 131 residue fragment of staphylococcal nuclease

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Structural characterization of the FK506 binding protein unfolded in urea and guanidine hydrochloride

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Extensive nonrandom structure in reduced and unfolded bovine pancreatic trypsin inhibitor

1 reference

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21 January 2018

The equilibrium folding pathway of staphylococcal nuclease: identification of the most stable chain-chain interactions by NMR and CD spectroscopy

1 reference

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21 January 2018

Cold denaturation of barstar: 1H, 15N and 13C NMR assignment and characterisation of residual structure

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Exploring the energy surface of protein folding by structure-reactivity relationships and engineered proteins: observation of Hammond behavior for the gross structure of the transition state and anti-Hammond behavior for structural elements for unfo

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Acid and thermal denaturation of barnase investigated by molecular dynamics simulations

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Structure of the transition state for folding of the 129 aa protein CheY resembles that of a smaller protein, CI-2

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

An NMR study on the beta-hairpin region of barnase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Folding of barnase in parts

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13409

21 January 2018

Identifiers

10.1073/PNAS.94.25.13409

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

1997PNAS...9413409B

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

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