(Q33705164)

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Genome sequence of the deep-rooted Yersinia pestis strain Angola reveals new insights into the evolution and pangenome of the plague bacterium

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Europe PubMed Central

PubMed publication ID

28 July 2017

Genome sequence of the deep-rooted Yersinia pestis strain Angola reveals new insights into the evolution and pangenome of the plague bacterium (English)

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Europe PubMed Central

PubMed publication ID

28 July 2017

Yersinia pestis

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9

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Europe PubMed Central

PubMed publication ID

28 July 2017

7

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Mark Achtman

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Europe PubMed Central

PubMed publication ID

28 July 2017

author name string

Mark Eppinger

1

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Europe PubMed Central

PubMed publication ID

28 July 2017

Patricia L Worsham

2

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Europe PubMed Central

PubMed publication ID

28 July 2017

Mikeljon P Nikolich

3

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Europe PubMed Central

PubMed publication ID

28 July 2017

David R Riley

4

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Europe PubMed Central

PubMed publication ID

28 July 2017

Yinong Sebastian

5

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Europe PubMed Central

PubMed publication ID

28 July 2017

Sherry Mou

6

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Europe PubMed Central

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28 July 2017

Luther E Lindler

8

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Europe PubMed Central

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28 July 2017

language of work or name

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publication date

8 January 2010

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Europe PubMed Central

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28 July 2017

Journal of Bacteriology

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Europe PubMed Central

PubMed publication ID

28 July 2017

192

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Europe PubMed Central

PubMed publication ID

28 July 2017

6

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Europe PubMed Central

PubMed publication ID

28 July 2017

1685-1699

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Europe PubMed Central

PubMed publication ID

28 July 2017

Draft genome sequences of Yersinia pestis isolates from natural foci of endemic plague in China

1 reference

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21 June 2018

Genotyping and phylogenetic analysis of Yersinia pestis by MLVA: insights into the worldwide expansion of Central Asia plague foci

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21 June 2018

The single substitution I259T, conserved in the plasminogen activator Pla of pandemic Yersinia pestis branches, enhances fibrinolytic activity.

1 reference

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21 June 2018

Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens

1 reference

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21 June 2018

Molecular Darwinian evolution of virulence in Yersinia pestis

1 reference

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21 June 2018

Yersinia pestis IS1541 transposition provides for escape from plague immunity

1 reference

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21 June 2018

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

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21 June 2018

Attenuated enzootic (pestoides) isolates of Yersinia pestis express active aspartase

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21 June 2018

Dynamics of genome rearrangement in bacterial populations

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21 June 2018

A study of the nucleotide sequence variability of rha locus genes of Yersinia pestis main and non-main subspecies

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21 June 2018

Different region analysis for genotyping Yersinia pestis isolates from China

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Klebsiella pneumoniae multiresistance plasmid pMET1: similarity with the Yersinia pestis plasmid pCRY and integrative conjugative elements

1 reference

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21 June 2018

Structure and assembly of Yersinia pestis F1 antigen

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Pestoides F, an atypical Yersinia pestis strain from the former Soviet Union.

1 reference

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21 June 2018

The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of Far East scarlet-like fever

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Yersinia pestis evolution on a small timescale: comparison of whole genome sequences from North America

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Transcription activation by the DNA-binding domain of the AraC family protein RhaS in the absence of its effector-binding domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Multiple antimicrobial resistance in plague: an emerging public health risk

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

A North American Yersinia pestis draft genome sequence: SNPs and phylogenetic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

A plasminogen-activating protease specifically controls the development of primary pneumonic plague

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Efficient tracing of global isolates of Yersinia pestis by restriction fragment length polymorphism analysis using three insertion sequences as probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Complete Genome Sequence of Yersinia pestis Strains Antiqua and Nepal516: Evidence of Gene Reduction in an Emerging Pathogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Application of phylogenetic networks in evolutionary studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

The microbial pan-genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Differences in the stability of the plasmids of Yersinia pestis cultures in vitro: impact on virulence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Visualization of comparative genomic analyses by BLAST score ratio

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Microevolution and history of the plague bacillus, Yersinia pestis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Structural organization of the pFra virulence-associated plasmid of rhamnose-positive Yersinia pestis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Complete Genome Sequence of Yersinia pestis Strain 91001, an Isolate Avirulent to Humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Pathogenomics of mobile genetic elements of toxigenic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Bacterial variations on the methionine salvage pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Intraspecific diversity of Yersinia pestis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

The yersiniae--a model genus to study the rapid evolution of bacterial pathogens

1 reference

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21 June 2018

Bordetella species are distinguished by patterns of substantial gene loss and host adaptation

1 reference

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21 June 2018

Versatile and open software for comparing large genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Virulence of Pasteurella pestis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Pestoides F, a Yersinia pestis strain lacking plasminogen activator, is virulent by the aerosol route

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Conserved filamentous prophage in Escherichia coli O18:K1:H7 and Yersinia pestis biovar orientalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Genome sequence of Yersinia pestis KIM

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Fast algorithms for large-scale genome alignment and comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Genetic variability of Yersinia pestis isolates as predicted by PCR-based IS100 genotyping and analysis of structural genes encoding glycerol-3-phosphate dehydrogenase (glpD)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

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Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Genome sequence of Yersinia pestis, the causative agent of plague

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Yersinia pestis pFra shows biovar-specific differences and recent common ancestry with a Salmonella enterica serovar Typhi plasmid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Diversity in a variable-number tandem repeat from Yersinia pestis

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21 June 2018

Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

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Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

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21 June 2018

Multidrug resistance in Yersinia pestis mediated by a transferable plasmid

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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21 June 2018

Recombinant V antigen protects mice against pneumonic and bubonic plague caused by F1-capsule-positive and -negative strains of Yersinia pestis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2832528

21 June 2018

Relationship between virulence and immunity as revealed in recent studies of the F1 capsule of Yersinia pestis.

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21 June 2018

Studies on the contribution of the F1 capsule-associated plasmid pFra to the virulence of Yersinia pestis

1 reference

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Pathology of experimental pneumonic plague produced by fraction 1-positive and fraction 1-negative Yersinia pestis in African green monkeys (Cercopithecus aethiops).

1 reference

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Plague pandemics investigated by ribotyping of Yersinia pestis strains

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Identification of encapsulated and non-encapsulated Yersinia pestis by immunofluorescence tests using polyclonal and monoclonal antibodies

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21 June 2018

Plasmid content in Yersinia pestis strains of different origin

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Atypical plague bacilli isolated from rodents, fleas, and man

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An unusual strain of Pasteurella pestis isolated from a fatal human case of plague.

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30 October 2018

Design of a compartmentalized shotgun assembler for the human genome

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A cryptic 19-kilobase plasmid associated with U.S. isolates of Yersinia pestis: a dimer of the 9.5-kilobase plasmid.

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30 October 2018

Multicopy plasmid instability: the dimer catastrophe hypothesis.

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30 October 2018

Melibiose fermentation in the genus Yersina and its importance in the diagnosis of the varieties of Y. pestis

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https://pubmed.ncbi.nlm.nih.gov/20061468

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Geographical distribution of three species of Pasteurella pestis]

1 reference

https://pubmed.ncbi.nlm.nih.gov/20061468

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of the respiratory volumes of laboratory animals

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https://pubmed.ncbi.nlm.nih.gov/20061468

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.01518-09

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

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