(Q33733622)

29 July 2017

title

Predicting direct protein interactions from affinity purification mass spectrometry data (English)

1 reference

29 July 2017

4

Mathieu Blanchette

1 reference

29 July 2017

Ethan Dh Kim

1

1 reference

29 July 2017

Ashish Sabharwal

series ordinal

2

1 reference

29 July 2017

Adrian R Vetta

series ordinal

3

1 reference

29 July 2017

publication date

29 October 2010

1 reference

Algorithms for Molecular Biology

29 July 2017

published in

1 reference

29 July 2017

volume

5

1 reference

29 July 2017

page(s)

34

1 reference

A global protein kinase and phosphatase interaction network in yeast.

29 July 2017

cites work

1 reference

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Distinguishing direct versus indirect transcription factor-DNA interactions

21 June 2018

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High-resolution mapping of the protein interaction network for the human transcription machinery and affinity purification of RNA polymerase II-associated complexes

21 June 2018

1 reference

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High-quality binary protein interaction map of the yeast interactome network

21 June 2018

1 reference

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Steps towards a repertoire of comprehensive maps of human protein interaction networks: the Human Proteotheque Initiative (HuPI)

21 June 2018

1 reference

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From pull-down data to protein interaction networks and complexes with biological relevance

21 June 2018

1 reference

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Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Protein identification by tandem mass spectrometry and sequence database searching

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein

21 June 2018

1 reference

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A model for random sampling and estimation of relative protein abundance in shotgun proteomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Predicting protein complex membership using probabilistic network reliability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Changes in the protein expression of yeast as a function of carbon source

21 June 2018

1 reference

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A proteomic view of the Plasmodium falciparum life cycle

21 June 2018

1 reference

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Interaction generality, a measurement to assess the reliability of a protein-protein interaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

21 June 2018

1 reference

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Functional organization of the yeast proteome by systematic analysis of protein complexes

21 June 2018

1 reference

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DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

21 June 2018

1 reference

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A comprehensive two-hybrid analysis to explore the yeast protein interactome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Emergence of Scaling in Random Networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

A generic protein purification method for protein complex characterization and proteome exploration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Toward a functional analysis of the yeast genome through exhaustive two-hybrid screens

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

A Bayesian estimator of protein-protein association probabilities.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Increasing confidence of protein interactomes using network topological metrics.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

A topological measurement for weighted protein interaction network.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

Construction of reliable protein–protein interaction networks with a new interaction generality measure

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

A duplication growth model of gene expression networks

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991326

30 October 2018

Identifiers

DOI

10.1186/1748-7188-5-34

1 reference

29 July 2017

DBLP publication ID

journals/almob/KimSVB10

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1 reference

https://scigraph.springernature.com/pub.10.1186/1748-7188-5-34

9 September 2019

1 reference

29 July 2017

1 reference