(Q33733665)

29 July 2017

title

Detection of copy number variation from array intensity and sequencing read depth using a stepwise Bayesian model (English)

1 reference

29 July 2017

2

Mark B Gerstein

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29 July 2017

Zhengdong D Zhang

1

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29 July 2017

publication date

31 October 2010

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29 July 2017

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29 July 2017

volume

11

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29 July 2017

page(s)

539

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Creative Commons Attribution 2.0 Generic

29 July 2017

copyright license

start time

31 October 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

describes a project that uses

Bayes' theorem

1 reference

18 June 2022

https://europepmc.org/article/PMC/2992546

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA.

1 reference

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A fast and flexible method for the segmentation of aCGH data

28 July 2018

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A fast Bayesian change point analysis for the segmentation of microarray data

28 July 2018

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wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Global variation in copy number in the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

BTA, a novel reagent for DNA attachment on glass and efficient generation of solid-phase amplified DNA colonies.

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Accurate multiplex polony sequencing of an evolved bacterial genome

28 July 2018

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Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Denoising array-based comparative genomic hybridization data using wavelets

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

A statistical approach for array CGH data analysis

28 July 2018

1 reference

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A method for calling gains and losses in array CGH data

28 July 2018

1 reference

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CGH-Explorer: a program for analysis of array-CGH data

28 July 2018

1 reference

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Circular binary segmentation for the analysis of array-based DNA copy number data

28 July 2018

1 reference

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Detection of large-scale variation in the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Accurate detection of aneuploidies in array CGH and gene expression microarray data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Large-scale copy number polymorphism in the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Genome screening by comparative genomic hybridization

28 July 2018

1 reference

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Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

A Bayesian segmentation approach to ascertain copy number variations at the population level

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Flexible and accurate detection of genomic copy-number changes from aCGH.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Integrating copy number polymorphisms into array CGH analysis using a robust HMM.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

A Bayes regression approach to array-CGH data

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

High-resolution mapping of DNA copy alterations in human chromosome 22 using high-density tiling oligonucleotide arrays

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Genome sequencing in microfabricated high-density picolitre reactors

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

High-resolution genome-wide mapping of genetic alterations in human glial brain tumors

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Fine-scale structural variation of the human genome

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Quantile smoothing of array CGH data

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Analysis of array CGH data: from signal ratio to gain and loss of DNA regions

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2992546

Application of ROMA (representational oligonucleotide microarray analysis) to patients with cytogenetic rearrangements

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21034510

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-539

1 reference

29 July 2017

DBLP publication ID

journals/bmcbi/ZhangG10a

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference