(Q33758092)

29 July 2017

title

HiTEC: accurate error correction in high-throughput sequencing data (English)

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high-throughput sequencing

29 July 2017

main subject

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1

Lucian Ilie

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29 July 2017

Farideh Fazayeli

2

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29 July 2017

Silvana Ilie

series ordinal

3

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29 July 2017

language of work or name

English

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publication date

26 November 2010

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29 July 2017

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29 July 2017

volume

27

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29 July 2017

issue

3

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29 July 2017

page(s)

295-302

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ALLPATHS: de novo assembly of whole-genome shotgun microreads

29 July 2017

cites work

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

PASS: a program to align short sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

De novo fragment assembly with short mate-paired reads: Does the read length matter?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

MOM: maximum oligonucleotide mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Extending assembly of short DNA sequences to handle error.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

SeqMap: mapping massive amount of oligonucleotides to the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Mapping short DNA sequencing reads and calling variants using mapping quality scores

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

SOAP: short oligonucleotide alignment program

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

ZOOM! Zillions of oligos mapped

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Slider--maximum use of probability information for alignment of short sequence reads and SNP detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Suffix Arrays: A New Method for On-Line String Searches

21 January 2018

1 reference

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The impact of next-generation sequencing technology on genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

The fragment assembly string graph

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

SHRiMP: accurate mapping of short color-space reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Correction of sequencing errors in a mixed set of reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

DNA sequencing with chain-terminating inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

CloudBurst: highly sensitive read mapping with MapReduce

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

SHREC: a short-read error correction method

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

A parallel algorithm for error correction in high-throughput short-read data on CUDA-enabled graphics hardware

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

ABySS: a parallel assembler for short read sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Using quality scores and longer reads improves accuracy of Solexa read mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Assembling millions of short DNA sequences using SSAKE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Reptile: representative tiling for short read error correction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ653

10.1093/BIOINFORMATICS/BTQ653

21 January 2018

Identifiers

DOI

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journals/bioinformatics/IlieFI11

29 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference