(Q33769853)

29 July 2017

Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo (English)

1 reference

Putative RAB family GTPase

29 July 2017

0 references

0 references

Ortholog(s) have role in cellular response to biotic stimulus, cellular response to starvation and filamentous growth of a population of unicellular organisms in response to biotic stimulus, more

0 references

Putative phosphotransferase with a predicted role in phospholipid metabolism

0 references

Ortholog(s) have role in vesicle-mediated transport and cell division site, cell tip, cytosol, nucleus, prospore membrane localization

0 references

Putative oligosaccharyltransferase beta subunit

0 references

Putative 70 kilodalton heat shock protein

0 references

Putative translocon, beta subunit

0 references

Putative peptidyl-prolyl cis-trans isomerase D (PPIase)

0 references

Peptidyl-prolyl cis-trans isomerase B, putative

0 references

Putative nuclear pore complex protein with homology to Saccharomyces cerevisiae Sec13p

0 references

Putative peptidyl-prolyl cis-trans isomerase (PPIase)

0 references

Putative signal recognition particle protein

0 references

Putative ubiquitin-conjugating enzyme

0 references

Ortholog(s) have HDEL sequence binding activity, role in ER to Golgi vesicle-mediated transport, protein retention in ER lumen and Golgi apparatus, integral component of endoplasmic reticulum membrane localization

0 references

Putative GTPase with a predicted role in transport between cis and medial Golgi compartments

0 references

Putative oligosaccharyltransferase epsilon subunit

0 references

Putative regulator of mannosylphosphorylation

0 references

FKBP-type peptidyl-prolyl cis-trans isomerase

0 references

Putative GTPase required for early endosome trafficking

0 references

3-hydroxy-3-methylglutaryl-CoA reductase, putative

0 references

Putative peptidyl-prolyl cis-trans isomerase (PPIase)

0 references

Response regulator, part of a two-component signal transduction system involved in control of stress response and conidiation

0 references

Putative peptidyl-prolyl cis-trans isomerase

0 references

putative calnexin

0 references

Putative pyrroline-5-carboxylate reductase with a predicted role in proline metabolism

0 references

Putative Rab-like GTPase

0 references

Putative protein disulfide isomerase

0 references

Putative calcium-transporting ATPase with a predicted role in energy metabolism

0 references

Putative GTPase with a role in retrograde traffic from endosomes to the Golgi

0 references

Ortholog of A. fumigatus Af293 : Afu5g06970, A. niger CBS 513.88 : An17g00170, A. oryzae RIB40 : AO090701000290, Aspergillus versicolor : Aspve1_0135244 and Aspergillus clavatus NRRL 1 : ACLA_010110

0 references

Ortholog(s) have cytosol, nucleus localization

0 references

Putative myo-inositol-1-phosphate synthase with a predicted role in phospholipid metabolism

0 references

Protein associated with the nonclassical protein export pathway

0 references

Putative translocon, alpha subunit

0 references

Ortholog(s) have phosphatidylinositol-3-phosphate binding activity, role in CVT pathway, early endosome to Golgi transport, mitophagy and cytosol, endosome, extrinsic component of membrane, pre-autophagosomal structure localization

0 references

Putative ER protein-translocation complex subunit

0 references

Essential phospho-Ser/Thr-directed peptidyl prolyl-isomerase involved in cell cycle progression

0 references

1-acylglycerol-3-phosphate O-acyltransferase, putative

0 references

dicarboxylic amino acid permease

0 references

Putative 60 kilodalton heat shock protein

0 references

Hsp70-family protein

0 references

Ortholog(s) have ubiquitin binding activity

0 references

Putative Rab GDP-dissociation inhibitor

0 references

Putative Sec1p-like protein with a predicted role in vacuolar protein sorting

0 references

TRAPP II complex subunit Trs120

0 references

Ortholog(s) have GTP binding, signal recognition particle binding activity, role in protein targeting to ER and cytosol, nucleus, signal recognition particle receptor complex localization

0 references

Putative ADP ribosylation factor guanine nucleotide exchange factor

0 references

Putative mannosyltransferase

0 references

Transcriptional activator hacA, putative

0 references

Ortholog(s) have cytosol, plasma membrane localization

0 references

ADP-ribosylation factor, putative

0 references

Protein that plays a role in sensitivity to DNA-damaging agents

0 references

Ortholog(s) have endoplasmic reticulum localization

0 references

Ortholog of A. fumigatus Af293 : Afu1g15110, A. niger CBS 513.88 : An01g13270, A. oryzae RIB40 : AO090005001214, Neosartorya fischeri NRRL 181 : NFIA_010310 and Aspergillus wentii : Aspwe1_0051140

0 references

Putative chaperone of the endoplasmic reticulum (ER) lumen

0 references

Putative ER protein-translocation complex subunit

0 references

Protein with a predicted role in ER-associated protein degradation

0 references

Ortholog(s) have 7S RNA binding activity and role in SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane, translocation

0 references

Putative protein translocation complex subunit

0 references

L-amino acid oxidase

0 references

Putative GTPase with a predicted role in intra-Golgi transport

0 references

Putative protein disulfide isomerase

0 references

Putative phosphatidylinositol transfer protein

0 references

Sensor for unfolded proteins in the ER ire1, putative

0 references

Putative small GTPase involved in endosomal maturation and vacuolar biogenesis

0 references

Putative protein disulfide isomerase

0 references

Putative protein transport protein

0 references

Putative heat shock protein

0 references

Ortholog(s) have protein transporter activity, role in filamentous growth, posttranslational protein targeting to membrane, translocation and Sec62/Sec63 complex localization

0 references

Putative zinc-finger protein with a predicted role in ER unfolded protein degradation

0 references

Putative oligosaccharyltransferase delta subunit

0 references

Putative phytase with a predicted role in phytic acid catabolism

0 references

Endoplasmic reticulum packaging chaperone, required for incorporation of amino acid permeases (aspartate and proline transporters) into COPII coated vesicles for transport to the cell surface

0 references

Putative mannose-1-phosphate guanyltransferase

0 references

Putative ER-resident chaperone of the HSP70 family

0 references

Putative ubiquitin-specific protease

0 references

Putative ubiquitin-activating enzyme

0 references

HOPS/CORVET complex subunit, vacuolar sorting protein, putative

0 references

Similar to syntaxin proteins

0 references

Putative P-type ATPase

0 references

Putative signal sequence processing protein with a predicted role in targeting proteins to the endoplasmic reticulum

0 references

Transcript levels increase during the unfolded-protein response (UPR)

0 references

Putative secretory component

0 references

Ortholog(s) have ATP binding, ATPase activity, protein homodimerization activity

0 references

Putative 26S proteasome regulatory subunit

0 references

FKBP-type peptidyl-prolyl cis-trans isomerase, putative

0 references

Putative GTPase with a predicted role in ER to Golgi transport

0 references

70 kilodalton heat shock protein

0 references

Putative 30 kilodalton heat shock protein

0 references

Protein with a predicted role in asparagine-linked glycosylation

0 references

Putative ubiquitin-conjugating enzyme

0 references

Protein involved in DNA repair

0 references

Aspergillus nidulans

object named as

Aspergillus nidulans

1 reference

Andrew H Sims

1

0 references

author name string

Manda E Gent

2

1 reference

29 July 2017

Karin Lanthaler

3

1 reference

29 July 2017

Nigel S Dunn-Coleman

4

1 reference

29 July 2017

Stephen G Oliver

5

1 reference

29 July 2017

Geoffrey D Robson

6

1 reference

29 July 2017

language of work or name

English

0 references

publication date

1 May 2005

1 reference

Applied and Environmental Microbiology

29 July 2017

1 reference

29 July 2017

71

1 reference

29 July 2017

5

1 reference

29 July 2017

2737-2747

1 reference

Glutamic protease distribution is limited to filamentous fungi

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Combining transcriptome data with genomic and cDNA sequence alignments to make confident functional assignments for Aspergillus nidulans genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Negative subtraction hybridization: an efficient method to isolate large numbers of condition-specific cDNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Global analysis of nutrient control of gene expression in Saccharomyces cerevisiae during growth and starvation.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Use of expressed sequence tag analysis and cDNA microarrays of the filamentous fungus Aspergillus nidulans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

The transcription factor HACA mediates the unfolded protein response in Aspergillus niger, and up-regulates its own transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Role of the unfolded protein response pathway in regulation of INO1 and in the sec14 bypass mechanism in Saccharomyces cerevisiae.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Filamentous fungi as cell factories for heterologous protein production

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

The secretion pathway in filamentous fungi: a biotechnological view

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Small GTP-binding proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Genomic expression programs in the response of yeast cells to environmental changes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Filamentous fungi as microbial cell factories for food use.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

A concise guide to cDNA microarray analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Functional and genomic analyses reveal an essential coordination between the unfolded protein response and ER-associated degradation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Molecular characterization of a PDI-related gene prpA in Aspergillus niger var. awamori

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Protein targeting to the endoplasmic reticulum in yeast. 1997 Fleming Lecture

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Vesicular transport: how many Ypt/Rab-GTPases make a eukaryotic cell?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

The ER chaperone encoding bipA gene of black Aspergilli is induced by heat shock and unfolded proteins.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Molecular evidence for an ancient duplication of the entire yeast genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Efficient production of secreted proteins by Aspergillus: progress, limitations and prospects

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Overexpression of binding protein and disruption of the PMR1 gene synergistically stimulate secretion of bovine prochymosin but not plant thaumatin in yeast.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

From DNA sequence to biological function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Protein disulfide isomerase mutant lacking its isomerase activity accelerates protein folding in the cell.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Synthesis of calf prochymosin (prorennin) in Escherichia coli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

A GTP-binding protein required for secretion rapidly associates with secretory vesicles and the plasma membrane in yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Production of extracellular proteins by the filamentous fungus Aspergillus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Commercial levels of chymosin production by Aspergillus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Identification of a novel gene hbrB required for polarised growth in Aspergillus nidulans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Improvement of foreign-protein production in Aspergillus niger var. awamori by constitutive induction of the unfolded-protein response

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

The effects of drugs inhibiting protein secretion in the filamentous fungus Trichoderma reesei. Evidence for down-regulation of genes that encode secreted proteins in the stressed cells

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Activation mechanisms of the HAC1-mediated unfolded protein response in filamentous fungi

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Genomic analysis of the unfolded protein response in Arabidopsis shows its connection to important cellular processes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Mcm1p-induced DNA bending regulates the formation of ternary transcription factor complexes.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

The foldase CYPB is a component of the secretory pathway of Aspergillus niger and contains the endoplasmic reticulum retention signal HEEL.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Production of tissue plasminogen activator (t-PA) in Aspergillus niger

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Identification and characterization of a family of secretion-related small GTPase-encoding genes from the filamentous fungus Aspergillus niger: a putative SEC4 homologue is not essential for growth

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Glucoamylase::green fluorescent protein fusions to monitor protein secretion in Aspergillus niger

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Molecular cloning and characterization of Aspergillus nidulans cyclophilin B.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Hydrolysis of GTP on rab11 is required for the direct delivery of transferrin from the pericentriolar recycling compartment to the cell surface but not from sorting endosomes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Isolation and characterisation of a gene encoding protein disulphide isomerase, pdiA, from Aspergillus niger.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Nucleotide sequence of the Aspergillus niger srpA gene

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Use of Aspergillus overproducing mutants, cured for integrated plasmid, to overproduce heterologous proteins

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Expression of calf prochymosin in Saccharomyces cerevisiae

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087583

Expression of cloned calf prochymosin gene sequence in Escherichia coli

30 October 2018

1 reference

12 December 2020

Efficient synthesis of enzymatically active calf chymosin in Saccharomyces cerevisiae

1 reference

12 December 2020

Improved production of chymosin in Aspergillus by expression as a glucoamylase-chymosin fusion

1 reference

12 December 2020

Secretion of calf chymosin from the filamentous fungus Aspergillus oryzae

1 reference

12 December 2020

Degradation of proteins from the ER of S. cerevisiae requires an intact unfolded protein response pathway

1 reference

12 December 2020

A glucoamylase::GFP gene fusion to study protein secretion by individual hyphae of Aspergillus niger

1 reference

12 December 2020

Functional implications of disulfide bond, Cys206-Cys210, in recombinant prochymosin (chymosin)

1 reference

12 December 2020

A defined level of protein disulfide isomerase expression is required for optimal secretion of thaumatin by Aspegillus awamori

1 reference

12 December 2020

Hybridization array technology coupled with chemostat culture: Tools to interrogate gene expression in Saccharomyces cerevisiae

1 reference

12 December 2020

Isolation and characterisation of a calnexin homologue, clxA, from Aspergillus niger

1 reference

12 December 2020

Analysis of the role of the gene bipA, encoding the major endoplasmic reticulum chaperone protein in the secretion of homologous and heterologous proteins in black Aspergilli

1 reference

12 December 2020

10.1128/AEM.71.5.2737-2747.2005

Identifiers

DOI

1 reference

29 July 2017

1 reference

29 July 2017

1 reference