(Q33785492)

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Concerted changes in gene expression and cell physiology of the cyanobacterium Synechocystis sp. strain PCC 6803 during transitions between nitrogen and light-limited growth

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scholarly article

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Europe PubMed Central

PubMed publication ID

29 July 2017

Concerted changes in gene expression and cell physiology of the cyanobacterium Synechocystis sp. strain PCC 6803 during transitions between nitrogen and light-limited growth (English)

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Europe PubMed Central

PubMed publication ID

29 July 2017

cell physiology

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based on heuristic

inferred from title

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based on heuristic

inferred from title

Eneas Aguirre von Wobeser

1

object named as

Eneas Aguirre von Wobeser

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

5

object named as

Jef Huisman

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Europe PubMed Central

PubMed publication ID

29 July 2017

author name string

Bas W Ibelings

2

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Jasper Bok

3

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Europe PubMed Central

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29 July 2017

Vladimir Krasikov

4

1 reference

Europe PubMed Central

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29 July 2017

Hans C P Matthijs

6

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Europe PubMed Central

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29 July 2017

language of work or name

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publication date

4 January 2011

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Europe PubMed Central

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29 July 2017

Plant Physiology

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Europe PubMed Central

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29 July 2017

155

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Europe PubMed Central

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29 July 2017

3

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Europe PubMed Central

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29 July 2017

1445-1457

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Europe PubMed Central

PubMed publication ID

29 July 2017

copyright license

Creative Commons Attribution 4.0 International

25 January 2021

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April 2022 Public Data File from Crossref

copyright status

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Changes in the cyanobacterial photosynthetic apparatus during acclimation to macronutrient deprivation

1 reference

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Pulsed nitrogen supply induces dynamic changes in the amino acid composition and microcystin production of the harmful cyanobacterium Planktothrix agardhii

1 reference

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CyanoBase: the cyanobacteria genome database update 2010.

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EcoCyc: a comprehensive view of Escherichia coli biology

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Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803.

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Nitrogen induction of sugar catabolic gene expression in Synechocystis sp. PCC 6803.

1 reference

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1 reference

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PII-regulated arginine synthesis controls accumulation of cyanophycin in Synechocystis sp. strain PCC 6803.

1 reference

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Computational inference and experimental validation of the nitrogen assimilation regulatory network in cyanobacterium Synechococcus sp. WH 8102.

1 reference

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30 October 2018

Regulatory links between carbon and nitrogen metabolism

1 reference

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Acclimation of chlorophyll a and carotenoid levels to different irradiances in four freshwater cyanobacteria.

1 reference

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Exploitation of genomic sequences in a systematic analysis to access how cyanobacteria sense environmental stress

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Functional flexibility and acclimation of the thylakoid membrane

1 reference

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Sucrose synthase and RuBisCo expression is similarly regulated by the nitrogen source in the nitrogen-fixing cyanobacterium Anabaena sp.

1 reference

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Continuous culture--making a comeback?

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Comparative genomics analysis of NtcA regulons in cyanobacteria: regulation of nitrogen assimilation and its coupling to photosynthesis

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Ammonium assimilation in cyanobacteria.

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Description of the chemostat

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1 reference

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1 reference

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1 reference

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1 reference

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3046598

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3046598

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3046598

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1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/21205618

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1 reference

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1 reference

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Identifiers

10.1104/PP.110.165837

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

ResearchGate publication ID

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