Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q33796471)
Watch
English
Towards building a disease-phenotype knowledge base: extracting disease-manifestation relationship from literature.
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
title
Towards building a disease-phenotype knowledge base: extracting disease-manifestation relationship from literature
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
main subject
knowledge base
1 reference
based on heuristic
inferred from title
phenotype
1 reference
based on heuristic
inferred from title
author
Rong Xu
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
author name string
Li Li
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
Quanqiu Wang
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
language of work or name
English
0 references
publication date
4 July 2013
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
published in
Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
volume
29
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
issue
17
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
page(s)
2186-2194
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
cites work
A semi-supervised approach to extract pharmacogenomics-specific drug-gene pairs from biomedical literature for personalized medicine.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Next-generation phenotyping of electronic health records
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Recent approaches to the prioritization of candidate disease genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
A knowledge-driven conditional approach to extract pharmacogenomics specific drug-gene relationships from free text
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Computational approaches to disease-gene prediction: rationale, classification and successes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
A computational method based on the integration of heterogeneous networks for predicting disease-gene associations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Using Electronic Patient Records to Discover Disease Correlations and Stratify Patient Cohorts
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Discovery and preclinical validation of drug indications using compendia of public gene expression data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Inferring gene-phenotype associations via global protein complex network propagation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Network-based methods for human disease gene prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
PhenomeNET: a whole-phenome approach to disease gene discovery
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Uncover disease genes by maximizing information flow in the phenome-interactome network
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Modularity-based credible prediction of disease genes and detection of disease subtypes on the phenotype-gene heterogeneous network.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Interactome networks and human disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
A guide to web tools to prioritize candidate genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Network medicine: a network-based approach to human disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Event extraction for systems biology by text mining the literature
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Unsupervised method for extracting machine understandable medical knowledge from a large free text collection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Associating genes and protein complexes with disease via network propagation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Advances in translational bioinformatics: computational approaches for the hunting of disease genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Predicting new molecular targets for known drugs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
PubChem as a Source of Polypharmacology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Linking genes to diseases: it's all in the data.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Human disease-drug network based on genomic expression profiles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Translational disease interpretation with molecular networks.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Drug discovery using chemical systems biology: repositioning the safe medicine Comtan to treat multi-drug and extensively drug resistant tuberculosis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Unsupervised method for automatic construction of a disease dictionary from a large free text collection.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
The implications of human metabolic network topology for disease comorbidity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Network-based global inference of human disease genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Probing genetic overlap among complex human phenotypes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
A human phenome-interactome network of protein complexes implicated in genetic disorders
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
From syndrome families to functional genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
The Unified Medical Language System (UMLS): integrating biomedical terminology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
EDGAR: extraction of drugs, genes and relations from the biomedical literature
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Automatic extraction of biological information from scientific text: protein-protein interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
4 July 2018
Inferring disease and gene set associations with rank coherence in networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
30 October 2018
Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
30 October 2018
The impact of cellular networks on disease comorbidity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
30 October 2018
Predicting compound selectivity by self-organizing maps: cross-activities of metabotropic glutamate receptor antagonists.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
30 October 2018
GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4068009
retrieved
30 October 2018
A text-mining analysis of the human phenome
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23828786
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Phenome connections
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23828786
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/BIOINFORMATICS/BTT359
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
DBLP publication ID
journals/bioinformatics/XuLW13
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
4068009
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
PubMed publication ID
23828786
1 reference
stated in
Europe PubMed Central
PMC publication ID
4068009
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23828786%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
ResearchGate publication ID
245538953
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit