(Q33798163)

29 July 2017

1 reference

title

The DIADEM data sets: representative light microscopy images of neuronal morphology to advance automation of digital reconstructions (English)

1 reference

29 July 2017

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Alison J Canty

3

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Vincenzo De Paola

object named as

Vincenzo De Paola

4

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Giorgio A. Ascoli

10

object named as

Giorgio A Ascoli

1 reference

29 July 2017

Gregory S.X.E. Jefferis

6

object named as

Gregory S X E Jefferis

1 reference

29 July 2017

Kerry M Brown

1

1 reference

29 July 2017

Germán Barrionuevo

2

1 reference

29 July 2017

Judith A Hirsch

5

1 reference

29 July 2017

Ju Lu

7

1 reference

29 July 2017

Marjolein Snippe

8

1 reference

29 July 2017

Izumi Sugihara

9

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29 July 2017

publication date

1 September 2011

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29 July 2017

number of pages

15

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published in

Neuroinformatics

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29 July 2017

volume

9

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29 July 2017

issue

2-3

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29 July 2017

page(s)

143-157

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The DIADEM metric: comparing multiple reconstructions of the same neuron

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Axonal reconstructions going live

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Neuronal tracing for connectomic studies

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Automated reconstruction of neuronal morphology: an overview.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Cooperative synapse formation in the neocortex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Locally balanced dendritic integration by short-term synaptic plasticity and active dendritic conductances

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Three-dimensional neuron tracing by voxel scooping

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Quantitative morphometry of electrophysiologically identified CA3b interneurons reveals robust local geometry and distinct cell classes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Semi-automated reconstruction of neural processes from large numbers of fluorescence images

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

The interscutularis muscle connectome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

NeuroMorpho.Org implementation of digital neuroscience: dense coverage and integration with the NIF

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Live neuron morphology automatically reconstructed from multiphoton and confocal imaging data.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Three-dimensional reconstruction of the axon arbor of a CA3 pyramidal cell recorded and filled in vivo.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Comprehensive maps of Drosophila higher olfactory centers: spatially segregated fruit and pheromone representation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Receptive field structure varies with layer in the primary visual cortex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Progress in functional neuroanatomy: precise automatic geometric reconstruction of neuronal morphology from confocal image stacks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

AMPA receptors regulate dynamic equilibrium of presynaptic terminals in mature hippocampal networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Neuronal morphology data bases: morphological noise and assesment of data quality

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Representation of the glomerular olfactory map in the Drosophila brain.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

An Olfactory Sensory Map in the Fly Brain

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Convergent projections of Drosophila olfactory neurons to specific glomeruli in the antennal lobe

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Mosaic analysis with a repressible cell marker for studies of gene function in neuronal morphogenesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Ascending projections of simple and complex cells in layer 6 of the cat striate cortex.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Coincidence detection of convergent perforant path and mossy fibre inputs by CA3 interneurons.

4 July 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Cell type-specific structural plasticity of axonal branches and boutons in the adult neocortex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Reconstruct: a free editor for serial section microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Microcircuitry of the Visual Cortex

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Functionally distinct inhibitory neurons at the first stage of visual cortical processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

A technicolour approach to the connectome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Laminar processing of stimulus orientation in cat visual cortex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Quantitative morphometry of hippocampal pyramidal cells: differences between anatomical classes and reconstructing laboratories

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

A universal property of axonal and dendritic arbors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

Systematic mapping between dendritic function and structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-010-9095-5

FUNCTIONAL SIGNIFICANCE OF CELL SIZE IN SPINAL MOTONEURONS

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Morphology of single olivocerebellar axons labeled with biotinylated dextran amine in the rat.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

In vivo intracellular analysis of granule cell axon reorganization in epileptic rats

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Synaptic integration in striate cortical simple cells.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4342109

Neuroinformatics grand challenges

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21249531

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21249531

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S12021-010-9095-5

1 reference

journals/ni/BrownBCPHJLSSA11

29 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference