(Q33801727)

29 July 2017

title

Lineage-specific evolution of the vertebrate Otopetrin gene family revealed by comparative genomic analyses (English)

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29 July 2017

2

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29 July 2017

3

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NISC Comparative Sequencing Program

29 July 2017

Joseph F Ryan

5

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David M. Ornitz

object named as

David M Ornitz

series ordinal

8

0 references

series ordinal

6

object named as

NISC Comparative Sequencing Program

1 reference

29 July 2017

9

Eric D Green

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29 July 2017

7

Evan E Eichler

1 reference

29 July 2017

1

Belen Hurle

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29 July 2017

4

Inna Hughes

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29 July 2017

language of work or name

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24 January 2011

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29 July 2017

published in

BMC Evolutionary Biology

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29 July 2017

volume

11

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29 July 2017

page(s)

23

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Regulation of cellular calcium in vestibular supporting cells by otopetrin 1

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates

4 July 2018

1 reference

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CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Bilateral vestibulopathy: clinical, diagnostic, and genetic considerations

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

CTCF: master weaver of the genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Characterization of six human disease-associated inversion polymorphisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

A burst of segmental duplications in the genome of the African great ape ancestor

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Characterization of apparently balanced chromosomal rearrangements from the developmental genome anatomy project

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Molecular mechanisms of chromosomal rearrangement during primate evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Identification of the Otopetrin Domain, a conserved domain in vertebrate otopetrins and invertebrate otopetrin-like family members

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Segmental duplications and evolutionary plasticity at tumor chromosome break-prone regions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Usher syndrome: animal models, retinal function of Usher proteins, and prospects for gene therapy

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Otopetrin 1 activation by purinergic nucleotides regulates intracellular calcium.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

High-resolution profiling of histone methylations in the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Usher syndrome: molecular links of pathogenesis, proteins and pathways

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Assembly of the otoconia complex to the macular sensory epithelium of the vestibule

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Mixing model systems: using zebrafish and mouse inner ear mutants and other organ systems to unravel the mystery of otoconial development

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Deletion of long-range sequences at Sox10 compromises developmental expression in a mouse model of Waardenburg-Shah (WS4) syndrome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

A genome-wide comparison of recent chimpanzee and human segmental duplications

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Training and aging modulate the loss-of-balance phenotype observed in a new ENU-induced allele of Otopetrin1.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Otopetrin 1 is required for otolith formation in the zebrafish Danio rerio.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Mutated otopetrin 1 affects the genesis of otoliths and the localization of Starmaker in zebrafish

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Comparative analyses of multi-species sequences from targeted genomic regions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Complex Evolution of 7E Olfactory Receptor Genes in Segmental Duplications

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Non-syndromic vestibular disorder with otoconial agenesis in tilted/mergulhador mice caused by mutations in otopetrin 1

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Usher syndrome type I G (USH1G) is caused by mutations in the gene encoding SANS, a protein that associates with the USH1C protein, harmonin

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Mutations in a new scaffold protein Sans cause deafness in Jackson shaker mice

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Initial sequencing and comparative analysis of the mouse genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Parallel construction of orthologous sequence-ready clone contig maps in multiple species

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Recent segmental duplications in the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Heterozygous submicroscopic inversions involving olfactory receptor-gene clusters mediate the recurrent t(4;8)(p16;p23) translocation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

The human genome browser at UCSC

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Benign paroxysmal positional vertigo: a clinician's perspective

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Recent duplication, domain accretion and the dynamic mutation of the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Segmental duplications: organization and impact within the current human genome project assembly

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Olfactory receptor-gene clusters, genomic-inversion polymorphisms, and common chromosome rearrangements

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Mariner is defective in myosin VIIA: a zebrafish model for human hereditary deafness

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Miropeats: graphical DNA sequence comparisons

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Otoconin-22, the major protein of aragonitic frog otoconia, is a homolog of phospholipase A2.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Basic local alignment search tool

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Each otoconia polymorph has a protein unique to that polymorph

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Physical mapping of the mouse tilted locus identifies an association between human deafness loci DFNA6/14 and vestibular system development

4 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

SANS (USH1G) expression in developing and mature mammalian retina

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Expression zones of three novel genes abut the developing anterior neural plate of Xenopus embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Genesis and expansion of metazoan transcription factor gene classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Regulation of otic vesicle and hair cell stereocilia morphogenesis by Ena/VASP-like (Evl) in Xenopus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Mutations in cadherin 23 affect tip links in zebrafish sensory hair cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Duplicated genes with split functions: independent roles of protocadherin15 orthologues in zebrafish hearing and vision

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-23

Structural basis for mechanical transduction in the frog vestibular sensory apparatus: III. The organization of the otoconial mass

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Scanning electron microscopic study of amphibians otoconia

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Utricular otoconia of some amphibians have calcitic morphology

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3038909

Three-dimensional morphology of inner ear development inXenopus laevis

30 October 2018

1 reference

12 December 2020

Genetic heterogeneity in Usher syndrome

1 reference

12 December 2020

The t(4;8) is mediated by homologous recombination between olfactory receptor gene clusters, but other 4p16 translocations occur at random

1 reference

12 December 2020

Benign paroxysmal positional vertigo: some recent advances

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-11-23

1 reference

Dimensions Publication ID

29 July 2017

0 references

1 reference

29 July 2017

1 reference