(Q33804354)

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Transcriptome profile analysis of flowering molecular processes of early flowering trifoliate orange mutant and the wild-type [Poncirus trifoliata (L.) Raf.] by massively parallel signature sequencing

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Europe PubMed Central

PubMed publication ID

29 July 2017

Transcriptome profile analysis of flowering molecular processes of early flowering trifoliate orange mutant and the wild-type [Poncirus trifoliata (L.) Raf.] by massively parallel signature sequencing (English)

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Europe PubMed Central

PubMed publication ID

29 July 2017

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Trifoliate orange

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Poncirus trifoliata

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Jin-Zhi Zhang

1

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Europe PubMed Central

PubMed publication ID

29 July 2017

Xiao-Yan Ai

2

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Europe PubMed Central

PubMed publication ID

29 July 2017

Lei-Ming Sun

3

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Europe PubMed Central

PubMed publication ID

29 July 2017

Dong-Liang Zhang

4

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Europe PubMed Central

PubMed publication ID

29 July 2017

Wen-Wu Guo

5

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Europe PubMed Central

PubMed publication ID

29 July 2017

Xiu-Xin Deng

6

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Europe PubMed Central

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29 July 2017

Chun-Gen Hu

7

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29 July 2017

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publication date

26 January 2011

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Europe PubMed Central

PubMed publication ID

29 July 2017

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Europe PubMed Central

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29 July 2017

12

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29 July 2017

63

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Europe PubMed Central

PubMed publication ID

29 July 2017

PtSVP, an SVP homolog from trifoliate orange (Poncirus trifoliata L. Raf.), shows seasonal periodicity of meristem determination and affects flower development in transgenic Arabidopsis and tobacco plants

1 reference

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Comparative genomics of flowering time pathways using Brachypodium distachyon as a model for the temperate grasses

1 reference

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4 July 2018

Regulation and function of SOC1, a flowering pathway integrator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Seasonal and developmental timing of flowering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing

1 reference

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4 July 2018

Comparative transcripts profiling reveals new insight into molecular processes regulating lycopene accumulation in a sweet orange (Citrus sinensis) red-flesh mutant

1 reference

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A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus.

1 reference

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4 July 2018

Gene stacking in 1-year-cycling APETALA1 citrus plants for a rapid evaluation of transgenic traits in reproductive tissues

1 reference

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4 July 2018

PtFLC homolog from trifoliate orange (Poncirus trifoliata) is regulated by alternative splicing and experiences seasonal fluctuation in expression level.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

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1 reference

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4 July 2018

Identification of flowering-related genes between early flowering trifoliate orange mutant and wild-type trifoliate orange (Poncirus trifoliata L. Raf.) by suppression subtraction hybridization (SSH) and macroarray.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Identification of early-flower-related ESTs in an early-flowering mutant of trifoliate orange (Poncirus trifoliata) by suppression subtractive hybridization and macroarray analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Citrus genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Comparative expression profiling in grape (Vitis vinifera) berries derived from frequency analysis of ESTs and MPSS signatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Wheat FT protein regulates VRN1 transcription through interactions with FDL2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Functional characterization of AP3, SOC1 and WUS homologues from citrus (Citrus sinensis).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Genome-wide allele-specific expression analysis using Massively Parallel Signature Sequencing (MPSS) reveals cis- and trans-effects on gene expression in maize hybrid meristem tissue.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

PlantTFDB: a comprehensive plant transcription factor database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Transcriptomic analysis of growth heterosis in larval Pacific oysters (Crassostrea gigas).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Evolutionary conservation of the FLOWERING LOCUS C-mediated vernalization response: evidence from the sugar beet (Beta vulgaris).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Global transcriptional profiling of the toxic dinoflagellate Alexandrium fundyense using Massively Parallel Signature Sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

CONSTANS activates SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 through FLOWERING LOCUS T to promote flowering in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

An atlas of human gene expression from massively parallel signature sequencing (MPSS).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Analysis of flowering pathway integrators in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

The use of MPSS for whole-genome transcriptional analysis in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Analysis of the transcriptional complexity of Arabidopsis thaliana by massively parallel signature sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

It's time to flower: the genetic control of flowering time

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Multiple pathways in the decision to flower: enabling, promoting, and resetting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Molecular and genetic mechanisms of floral control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Photoreceptor regulation of CONSTANS protein in photoperiodic flowering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Empirical analysis of transcriptional activity in the Arabidopsis genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Using the transcriptome to annotate the genome

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Integration of floral inductive signals in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

Activation tagging of the floral inducer FT.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

4 July 2018

A pair of related genes with antagonistic roles in mediating flowering signals.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039610

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1 reference

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Arabidopsis mutants showing an altered response to vernalization

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4 July 2018

A repressor complex governs the integration of flowering signals in Arabidopsis.

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21 January 2018

The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex.

1 reference

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21 January 2018

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21 January 2018

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21 January 2018

Arabidopsis MPSS. An online resource for quantitative expression analysis

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21 January 2018

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30 October 2018

Features of Arabidopsis genes and genome discovered using full-length cDNAs

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https://pubmed.ncbi.nlm.nih.gov/21269450

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GENETIC CONTROL OF FLOWERING TIME IN ARABIDOPSIS

1 reference

https://pubmed.ncbi.nlm.nih.gov/21269450

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of flowering time by histone acetylation in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/21269450

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-12-63

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-63

9 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

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