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PiNGO: a Cytoscape plugin to find candidate genes in biological networks.
scientific article
PiNGO: a Cytoscape plugin to find candidate genes in biological networks
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
title
PiNGO: a Cytoscape plugin to find candidate genes in biological networks
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
main subject
biological network
0 references
Cytoscape
1 reference
based on heuristic
inferred from title
Candidate gene
0 references
author
Steven Maere
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
Trey Ideker
series ordinal
3
object named as
Trey Ideker
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
Keiichiro Ono
series ordinal
2
object named as
Keiichiro Ono
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
Michael Smoot
series ordinal
1
object named as
Michael Smoot
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
language of work or name
English
0 references
publication date
28 January 2011
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
published in
Bioinformatics
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
volume
27
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
issue
7
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
page(s)
1030-1031
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
describes a project that uses
Cytoscape
2 references
based on heuristic
inferred from title
stated in
Europe PubMed Central
retrieved
9 June 2022
reference URL
https://europepmc.org/search?query=(METHODS:'Cytoscape')
based on heuristic
inferred from PubMed Central ID database lookup
cites work
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana
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PubMed Central
reference URL
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4 July 2018
Extracting expression modules from perturbational gene expression compendia
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reference URL
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4 July 2018
Network-based prediction of protein function
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
retrieved
4 July 2018
Gene prioritization through genomic data fusion
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
retrieved
4 July 2018
Cytoscape: a software environment for integrated models of biomolecular interaction networks
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters
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4 July 2018
A network of protein-protein interactions in yeast
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reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
Functional discovery via a compendium of expression profiles
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
Gene ontology: tool for the unification of biology
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3065683
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4 July 2018
The art of gene function prediction.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR045
retrieved
21 January 2018
Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR045
retrieved
21 January 2018
Identifiers
DOI
10.1093/BIOINFORMATICS/BTR045
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
DBLP publication ID
journals/bioinformatics/SmootOIM11
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
3065683
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
PubMed ID
21278188
1 reference
stated in
Europe PubMed Central
PMCID
3065683
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21278188%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
ResearchGate publication ID
49795528
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