(Q33818377)

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Enthalpy of helix-coil transition: missing link in rationalizing the thermodynamics of helix-forming propensities of the amino acid residues

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Enthalpy of helix-coil transition: missing link in rationalizing the thermodynamics of helix-forming propensities of the amino acid residues (English)

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

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author name string

John M Richardson

1

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Maria M Lopez

2

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

George I Makhatadze

3

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

language of work or name

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publication date

25 January 2005

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

102

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

1413-1418

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Origin of the neighboring residue effect on peptide backbone conformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Simulation of the folding equilibrium of α-helical peptides: A comparison of the generalized Born approximation with explicit solvent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Role of Backbone Hydration and Salt-Bridge Formation in Stability of α-Helix in Solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Peptide folding simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Role of backbone solvation and electrostatics in generating preferred peptide backbone conformations: Distributions of phi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

In search of the energetic role of peptide hydrogen bonds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Circular dichroism spectra of short, fixed-nucleus alanine helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

The enthalpy of the alanine peptide helix measured by isothermal titration calorimetry using metal-binding to induce helix formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Hydration of the peptide backbone largely defines the thermodynamic propensity scale of residues at the C' position of the C-capping box of alpha-helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Energetics of the interaction between water and the helical peptide group and its role in determining helix propensities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Interaction between water and polar groups of the helix backbone: an important determinant of helix propensities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Is protein folding hierarchic? I. Local structure and peptide folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Alpha-helix nucleation by a calcium-binding peptide loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Deciphering rules of helix stability in peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

A helix propensity scale based on experimental studies of peptides and proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Helix propagation and N-cap propensities of the amino acids measured in alanine-based peptides in 40 volume percent trifluoroethanol

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Energetics of protein structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Determination of alpha-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Stability of alpha-helices

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Alpha-helix stabilization by natural and unnatural amino acids with alkyl side chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Straight-chain non-polar amino acids are good helix-formers in water.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Calorimetric determination of the enthalpy change for the alpha-helix to coil transition of an alanine peptide in water

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Side-chain entropy opposes alpha-helix formation but rationalizes experimentally determined helix-forming propensities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

The mechanism of alpha-helix formation by peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Alpha-helix stability in proteins. II. Factors that influence stability at an internal position

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547846

4 July 2018

Relative helix-forming tendencies of nonpolar amino acids

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Noncharged amino acid residues at the solvent-exposed positions in the middle and at the C terminus of the alpha-helix have the same helical propensity

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

MEARA sequence repeat of human CstF-64 polyadenylation factor is helical in solution. A spectroscopic and calorimetric study.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Temperature dependence of the thermodynamics of helix-coil transition

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Elucidating the folding problem of alpha-helices: local motifs, long-range electrostatics, ionic-strength dependence and prediction of NMR parameters.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Experimental investigation of initial steps of helix propagation in model peptides.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Helix Propensities of Basic Amino Acids Increase with the Length of the Side-chain

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408004102

21 January 2018

Side chain contributions to the stability of alpha-helical structure in peptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/15671166

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Alpha-helix-forming propensities in peptides and proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/15671166

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolated calcium-binding loops of EF-hand proteins can dimerize to form a native-like structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/15671166

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of helix induction by trifluoroethanol: a framework for extrapolating the helix-forming properties of peptides from trifluoroethanol/water mixtures back to water

1 reference

https://pubmed.ncbi.nlm.nih.gov/15671166

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The thermodynamics of urea solutions and the heat of formation of the peptide hydrogen bond

1 reference

https://pubmed.ncbi.nlm.nih.gov/15671166

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The stability of hydrogen-bonded peptide structures in aqueous solution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15671166

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0408004102

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

2005PNAS..102.1413R

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

ResearchGate publication ID

0 references

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