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Hopping enables a DNA repair glycosylase to search both strands and bypass a bound protein.
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PMC publication ID
2861864
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
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19 January 2020
title
Hopping enables a DNA repair glycosylase to search both strands and bypass a bound protein
(English)
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PMC publication ID
2861864
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
author
Mark Hedglin
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1
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PMC publication ID
2861864
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19 January 2020
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Patrick J O'Brien
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2
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PMC publication ID
2861864
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
publication date
1 April 2010
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2861864
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retrieved
19 January 2020
published in
ACS Chemical Biology
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2861864
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
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19 January 2020
volume
5
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2861864
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
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19 January 2020
issue
4
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Europe PubMed Central
PMC publication ID
2861864
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
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19 January 2020
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427-436
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2861864
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19 January 2020
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Nonspecifically bound proteins spin while diffusing along DNA.
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PubMed Central
reference URL
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Kinetic mechanism for the flipping and excision of 1,N(6)-ethenoadenine by human alkyladenine DNA glycosylase
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Diffusion of the restriction nuclease EcoRI along DNA.
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28 July 2018
Human AP endonuclease 1 stimulates multiple-turnover base excision by alkyladenine DNA glycosylase
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28 July 2018
Proliferating cell nuclear antigen uses two distinct modes to move along DNA.
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An end to 40 years of mistakes in DNA-protein association kinetics?
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Using the bias from flow to elucidate single DNA repair protein sliding and interactions with DNA.
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28 July 2018
Human alkyladenine DNA glycosylase employs a processive search for DNA damage
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28 July 2018
Visualizing one-dimensional diffusion of proteins along DNA.
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28 July 2018
Uracil DNA glycosylase uses DNA hopping and short-range sliding to trap extrahelical uracils
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861864
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28 July 2018
Hopping of a processivity factor on DNA revealed by single-molecule assays of diffusion
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28 July 2018
Sliding and jumping of single EcoRV restriction enzymes on non-cognate DNA.
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28 July 2018
Protein roadblocks and helix discontinuities are barriers to the initiation of mismatch repair
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28 July 2018
Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA.
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28 July 2018
The DNA trackwalkers: principles of lesion search and recognition by DNA glycosylases
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28 July 2018
How do site-specific DNA-binding proteins find their targets?
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28 July 2018
How to get from A to B: strategies for analysing protein motion on DNA.
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28 July 2018
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28 July 2018
Linear diffusion of the restriction endonuclease EcoRV on DNA is essential for the in vivo function of the enzyme
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28 July 2018
Instability and decay of the primary structure of DNA
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28 July 2018
Processivity of Escherichia coli and rat liver mitochondrial uracil-DNA glycosylase is affected by NaCl concentration
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28 July 2018
Processivity of uracil DNA glycosylase
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28 July 2018
Exceptionally stable nucleic acid hairpins
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28 July 2018
Involvement of outside DNA sequences in the major kinetic path by which EcoRI endonuclease locates and leaves its recognition sequence
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28 July 2018
Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes
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28 July 2018
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28 July 2018
Biological significance of facilitated diffusion in protein-DNA interactions. Applications to T4 endonuclease V-initiated DNA repair
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28 July 2018
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28 July 2018
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28 July 2018
Correlated cleavage of damaged DNA by bacterial and human 8-oxoguanine-DNA glycosylases
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29 October 2018
A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.
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29 October 2018
RNA polymerase can track a DNA groove during promoter search
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29 October 2018
Protein motion from non-specific to specific DNA by three-dimensional routes aided by supercoiling
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29 October 2018
Escherichia coli MutY and Fpg utilize a processive mechanism for target location
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29 October 2018
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29 October 2018
Molecular basis for discriminating between normal and damaged bases by the human alkyladenine glycosylase, AAG
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29 October 2018
Pausing of the restriction endonuclease EcoRI during linear diffusion on DNA.
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29 October 2018
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29 October 2018
Thermodynamic parameters governing interaction of EcoRI endonuclease with specific and nonspecific DNA sequences
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29 October 2018
The kinetic mechanism of EcoRI endonuclease
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Isolation of gram quantities of EcoRI restriction and modification enzymes from an overproducing strain
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12 December 2020
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Protein sliding along DNA: dynamics and structural characterization
1 reference
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12 December 2020
based on heuristic
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Identifiers
DOI
10.1021/CB1000185
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Europe PubMed Central
PMC publication ID
2861864
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
PMC publication ID
2861864
1 reference
stated in
Europe PubMed Central
PMC publication ID
2861864
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
PubMed publication ID
20201599
1 reference
stated in
Europe PubMed Central
PMC publication ID
2861864
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20201599%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
ResearchGate publication ID
41759127
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