(Q33839360)

29 July 2017

title

Identification of tubular injury microRNA biomarkers in urine: comparison of next-generation sequencing and qPCR-based profiling platforms (English)

1 reference

29 July 2017

0 references

1 reference

Rounak Nassirpour

1

1 reference

29 July 2017

Sachin Mathur

2

1 reference

29 July 2017

Mark M Gosink

3

1 reference

29 July 2017

Yizheng Li

4

1 reference

29 July 2017

Ahmed M Shoieb

5

1 reference

29 July 2017

Joanna Wood

6

1 reference

29 July 2017

Shawn P O'Neil

7

1 reference

29 July 2017

Bruce L Homer

8

1 reference

29 July 2017

Laurence O Whiteley

9

1 reference

29 July 2017

language of work or name

English

0 references

publication date

18 June 2014

1 reference

29 July 2017

1 reference

29 July 2017

volume

15

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29 July 2017

page(s)

485

1 reference

describes a project that uses

29 July 2017

limma

object named as

Limma

2 references

22 June 2022

https://europepmc.org/article/PMC/4079956

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

object named as

EdgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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5 July 2018

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miRNA-Seq normalization comparisons need improvement

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Expression, circulation, and excretion profile of microRNA-21, -155, and -18a following acute kidney injury

5 July 2018

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5 July 2018

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5 July 2018

1 reference

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5 July 2018

1 reference

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Discovery of novel microRNAs in rat kidney using next generation sequencing and microarray validation

5 July 2018

1 reference

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Analysis of serum genome-wide microRNAs for breast cancer detection.

5 July 2018

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Comparison of the course of biomarker changes and kidney injury in a rat model of drug-induced acute kidney injury

5 July 2018

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Systems biology approach to identify transcriptome reprogramming and candidate microRNA targets during the progression of polycystic kidney disease

5 July 2018

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MicroRNAs in kidney function and disease

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

MicroRNAs and their target gene networks in renal cell carcinoma

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Differential expression analysis for sequence count data

5 July 2018

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MicroRNAs: exploring a new dimension in the pathogenesis of kidney cancer

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

1 reference

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Plasma microRNA profiling reveals loss of endothelial miR-126 and other microRNAs in type 2 diabetes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

5 July 2018

1 reference

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5 July 2018

1 reference

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Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis

5 July 2018

1 reference

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MicroRNAs and the kidney: coming of age.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Comparative analysis of novel noninvasive renal biomarkers and metabonomic changes in a rat model of gentamicin nephrotoxicity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Urinary biomarkers for sensitive and specific detection of acute kidney injury in humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Biomarkers of acute kidney injury

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Comparison of kidney injury molecule-1 and other nephrotoxicity biomarkers in urine and kidney following acute exposure to gentamicin, mercury, and chromium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Acute kidney injury, mortality, length of stay, and costs in hospitalized patients

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Rfam: an RNA family database

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Oxidant mechanisms in gentamicin nephrotoxicity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Aminoglycosides: nephrotoxicity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Molecular parameters involved in aminoglycoside nephrotoxicity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Nonparallel nephrotoxicity dose-response curves of aminoglycosides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Evidence suggesting a role for hydroxyl radical in gentamicin-induced acute renal failure in rats

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

A light and electron microscopic analysis of gentamicin nephrotoxicity in rats

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Characterization and deep sequencing analysis of exosomal and non-exosomal miRNA in human urine.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

The complex world of kidney microRNAs

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

miRNA profiling for clear cell renal cell carcinoma: biomarker discovery and identification of potential controls and consequences of miRNA dysregulation.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Differential expression of miRNA patterns in renal cell carcinoma and nontumorous tissues.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

Antioxidation and anti-inflammation by haem oxygenase-1 contribute to protection by tetramethylpyrazine against gentamicin-induced apoptosis in murine renal tubular cells

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079956

A roadmap for biomarker qualification

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24942259

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Circulating microRNA expression is reduced in chronic kidney disease

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24942259

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-15-485

1 reference

Dimensions Publication ID

29 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-485

9 September 2019

1 reference

29 July 2017

1 reference