(Q33839465)

29 July 2017

title

Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines (English)

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29 July 2017

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6

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16

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Jaaved Mohammed

2

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Nicolas Robine

Nicolas Robine

5

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Jiayu Wen

Jiayu Wen

1

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Eric C Lai

Eric C Lai

17

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Diane Bortolamiol-Becet

3

Diane Bortolamiol-Becet

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29 July 2017

10

Alex S Flynt

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29 July 2017

Harrison Tsai

4

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29 July 2017

Erik Ladewig

7

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29 July 2017

Qi Dai

8

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29 July 2017

Katsutomo Okamura

9

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29 July 2017

Dayu Zhang

11

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29 July 2017

Justen Andrews

12

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29 July 2017

Lucy Cherbas

13

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29 July 2017

Thomas C Kaufman

14

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29 July 2017

Peter Cherbas

15

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29 July 2017

publication date

1 July 2014

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29 July 2017

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29 July 2017

volume

24

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29 July 2017

issue

7

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29 July 2017

page(s)

1236-1250

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describes a project that uses

29 July 2017

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22 June 2022

https://europepmc.org/article/PMC/4079977

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila

5 July 2018

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Functional small RNAs are generated from select miRNA hairpin loops in flies and mammals

5 July 2018

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Beyond secondary structure: primary-sequence determinants license pri-miRNA hairpins for processing.

5 July 2018

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'See-saw' expression of microRNA-198 and FSTL1 from a single transcript in wound healing.

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Overlapping functions of microRNAs in control of apoptosis during Drosophila embryogenesis

5 July 2018

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5 July 2018

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The early bird catches the worm: new technologies for the Caenorhabditis elegans toolkit

5 July 2018

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RNAi screening: new approaches, understandings, and organisms

5 July 2018

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miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

5 July 2018

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Harnessing the potential of induced pluripotent stem cells for regenerative medicine

5 July 2018

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The developmental transcriptome of Drosophila melanogaster

5 July 2018

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Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

The transcriptional diversity of 25 Drosophila cell lines

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

From RNA-seq reads to differential expression results

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Neurite elongation from Drosophila neural BG2-c6 cells stimulated by 20-hydroxyecdysone

5 July 2018

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100 years of Drosophila research and its impact on vertebrate neuroscience: a history lesson for the future

5 July 2018

1 reference

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Evolutionary flux of canonical microRNAs and mirtrons in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

A broadly conserved pathway generates 3'UTR-directed primary piRNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Hierarchical rules for Argonaute loading in Drosophila

5 July 2018

1 reference

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Distinct mechanisms for microRNA strand selection by Drosophila Argonautes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

miR-184 has multiple roles in Drosophila female germline development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Endogenous small interfering RNAs in animals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Endogenous RNA interference provides a somatic defense against Drosophila transposons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Two distinct mechanisms generate endogenous siRNAs from bidirectional transcription in Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

An endogenous small interfering RNA pathway in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Temporal reciprocity of miRNAs and their targets during the maternal-to-zygotic transition in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

The regulatory activity of microRNA* species has substantial influence on microRNA and 3' UTR evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

MicroRNA targeting specificity in mammals: determinants beyond seed pairing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Establishment of stable cell lines of Drosophila germ-line stem cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Cell-type-specific signatures of microRNAs on target mRNA expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

The widespread impact of mammalian MicroRNAs on mRNA repression and evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Principles of microRNA-target recognition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Genome-wide RNAi analysis of growth and viability in Drosophila cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

A functional genomic analysis of cell morphology using RNA interference

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

The small RNA profile during Drosophila melanogaster development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Computational identification of Drosophila microRNA genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

An algorithm for clustering cDNA fingerprints

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Targeted mRNA degradation by double-stranded RNA in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Limitations and possibilities of small RNA digital gene expression profiling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Direct response to Notch activation: signaling crosstalk and incoherent logic.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

Functional genomic analysis of phagocytosis and identification of a Drosophila receptor for E. coli

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4079977

29 October 2018

Identifiers

DOI

10.1101/GR.161554.113

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29 July 2017

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29 July 2017

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