(Q33846368)

29 July 2017

Genome-wide identification and expression analysis of SBP-like transcription factor genes in Moso Bamboo (Phyllostachys edulis). (English)

1 reference

29 July 2017

0 references

Feng Pan

1

1 reference

29 July 2017

Yue Wang

2

1 reference

29 July 2017

Huanglong Liu

3

1 reference

29 July 2017

Min Wu

4

1 reference

29 July 2017

Wenyuan Chu

5

1 reference

29 July 2017

Danmei Chen

6

1 reference

29 July 2017

Yan Xiang

7

1 reference

29 July 2017

language of work or name

English

0 references

publication date

27 June 2017

1 reference

29 July 2017

1 reference

29 July 2017

18

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29 July 2017

1

1 reference

29 July 2017

486

1 reference

https://scigraph.springernature.com/pub.10.1186/s12864-017-3882-4

29 July 2017

0 references

cites work

Genome-Wide Identification and Analysis of the SBP-Box Family Genes under Phytophthora capsici Stress in Pepper (Capsicum annuum L.).

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Genome-wide identification and expression analysis of the IQD gene family in moso bamboo (Phyllostachys edulis).

5 July 2018

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Paralogous SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes differentially regulate leaf initiation and reproductive phase change in petunia

5 July 2018

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Molecular characterization of SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) gene family from Citrus and the effect of fruit load on their expression

5 July 2018

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Identification and characterization of microRNAs at different flowering developmental stages in moso bamboo (Phyllostachys edulis) by high-throughput sequencing

5 July 2018

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Genome-Wide Analysis of the AP2/ERF Transcription Factors Family and the Expression Patterns of DREB Genes in Moso Bamboo (Phyllostachys edulis)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Identification and expression analysis of the SQUAMOSA promoter-binding protein (SBP)-box gene family in Prunus mume.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genomic organization, differential expression, and functional analysis of the SPL gene family in Gossypium hirsutum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Differential retention and expansion of the ancestral genes associated with the paleopolyploidies in modern rosid plants, as revealed by analysis of the extensins super-gene family

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genome duplication and gene loss affect the evolution of heat shock transcription factor genes in legumes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Characterization of the floral transcriptome of Moso bamboo (Phyllostachys edulis) at different flowering developmental stages by transcriptome sequencing and RNA-seq analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genome-wide identification and evolutionary analysis of the SBP-box gene family in castor bean

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genomic organization, phylogenetic comparison and differential expression of the SBP-box family genes in grape

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Identification and expression analysis of cytokinin metabolic genes in soybean under normal and drought conditions in relation to cytokinin levels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genomic organization, phylogenetic comparison and differential expression of the SBP-box family of transcription factors in tomato

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Conservation and diversity of microRNA-associated copper-regulatory networks in Populus trichocarpa

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Analyses of the oligopeptide transporter gene family in poplar and grape

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Generation and analysis of expressed sequence tags from a normalized cDNA library of young leaf from Ma bamboo (Dendrocalamus latiflorus Munro).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

miR156-targeted and nontargeted SBP-box transcription factors act in concert to secure male fertility in Arabidopsis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Understanding bamboo flowering based on large-scale analysis of expressed sequence tags.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genome-wide characterization of the biggest grass, bamboo, based on 10,608 putative full-length cDNA sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

The maize SBP-box transcription factor encoded by tasselsheath4 regulates bract development and the establishment of meristem boundaries

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Sequencing technologies - the next generation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

SQUAMOSA Promoter Binding Protein-Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Analyzing real-time PCR data by the comparative C(T) method

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Next-generation sequencing transforms today's biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Genome size and sequence composition of moso bamboo: a comparative study

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

The regulatory code for transcriptional response diversity and its relation to genome structural properties in A. thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

TM4 microarray software suite

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

MEME: discovering and analyzing DNA and protein sequence motifs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Pfam: clans, web tools and services

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

InterProScan: protein domains identifier

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

SMART 4.0: towards genomic data integration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

In vivo introduction of unpreferred synonymous codons into the Drosophila Adh gene results in reduced levels of ADH protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Role of duplicate genes in genetic robustness against null mutations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Plant cis-acting regulatory DNA elements (PLACE) database: 1999

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Functional analysis of the Arabidopsis thaliana SBP-box gene SPL3: a novel gene involved in the floral transition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

A new family of DNA binding proteins includes putative transcriptional regulators of the Antirrhinum majus floral meristem identity gene SQUAMOSA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

Molecular characterisation of the Arabidopsis SBP-box genes.

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

The more and smaller cells mutants of Arabidopsis thaliana identify novel roles for SQUAMOSA PROMOTER BINDING PROTEIN-LIKE genes in the control of heteroblasty.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

The miRNA156/157 recognition element in the 3' UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

miR172 signals are incorporated into the miR156 signaling pathway at the SPL3/4/5 genes in Arabidopsis developmental transitions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

The SOC1-SPL module integrates photoperiod and gibberellic acid signals to control flowering time in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

SPL8, a local regulator in a subset of gibberellin-mediated developmental processes in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

A new SBP-box gene BpSPL1 in silver birch (Betula pendula).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Comparative analysis of the SBP-box gene families in P. patens and seed plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Genome-wide identification and analysis of the SBP-box family genes in apple (Malus × domestica Borkh.).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Genome-wide identification and phylogenetic analysis of the SBP-box gene family in melons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Genome-wide analysis and molecular dissection of the SPL gene family in Salvia miltiorrhiza

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Transcriptome-wide identification and expression analysis of chrysanthemum SBP-like transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

A genome-wide association study of seed protein and oil content in soybean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

DNA sequence polymorphism analysis using DnaSP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Genome-wide analysis of Aux/IAA gene family in Solanaceae species using tomato as a model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Identification of genes differentially expressed during interaction of resistant and susceptible apple cultivars (Malus x domestica) with Erwinia amylovora.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Comparative analysis of the receptor-like kinase family in Arabidopsis and rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3882-4

Cloning and characterization of SPL-family genes in the peanut (Arachis hypogaea L.).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5488377

The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28655295

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genome-wide identification and expression analysis of the IQD gene family in Populus trichocarpa

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28655295

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12864-017-3882-4

1 reference

Dimensions Publication ID

29 July 2017

0 references

1 reference

29 July 2017

1 reference